Cluster: MGYG000004120_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004120
- CGC Family ID: CGCFAM_02187
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004120_1 | MGYG000004120_1_99 | 94503 | 97034 | + | CBM13 | CBM13 | CBM13 | CBM13 | GH25 |
| CAZyme | MGYG000004120_1 | MGYG000004120_1_100 | 97125 | 98066 | + | GT2 |
| pfam | MGYG000004120_1 | MGYG000004120_1_101 | 98146 | 99042 | + | Lipase_GDSL |
| NULL(UNKNOWN) | MGYG000004120_1 | MGYG000004120_1_102 | 99070 | 99162 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004120_1 | MGYG000004120_1_103 | 99253 | 99882 | + | 9.B.98.2.1 |
Gene ID: MGYG000004120_1_99
Type: CAZyme
Location: 94503 - 97034 (+)
Type: CAZyme
Location: 94503 - 97034 (+)
Gene ID: MGYG000004120_1_100
Type: CAZyme
Location: 97125 - 98066 (+)
Type: CAZyme
Location: 97125 - 98066 (+)
Gene ID: MGYG000004120_1_101
Type: pfam
Location: 98146 - 99042 (+)
Type: pfam
Location: 98146 - 99042 (+)
Gene ID: MGYG000004120_1_102
Type:
Location: 99070 - 99162 (-)
Type:
Location: 99070 - 99162 (-)
Gene ID: MGYG000004120_1_103
Type: TC
Location: 99253 - 99882 (+)
Type: TC
Location: 99253 - 99882 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Coprosoma
Species
Coprosoma sp900546055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.