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Cluster: MGYG000004116_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004116_2 MGYG000004116_2_51 54279 55979 + 8.A.59.2.1
TF MGYG000004116_2 MGYG000004116_2_52 55979 57631 + HTH_AraC | HTH_AraC
TC MGYG000004116_2 MGYG000004116_2_53 57814 59499 + 3.A.1.1.9
STP MGYG000004116_2 MGYG000004116_2_54 59606 62512 + SBP_bac_1
TC MGYG000004116_2 MGYG000004116_2_55 62505 63452 + 3.A.1.1.36
TC MGYG000004116_2 MGYG000004116_2_56 63454 64308 + 3.A.1.1.39
pfam MGYG000004116_2 MGYG000004116_2_57 64329 66455 + NHL | Yip1
pfam MGYG000004116_2 MGYG000004116_2_58 66500 68689 + DUF5696
TC MGYG000004116_2 MGYG000004116_2_59 68705 69604 + 3.A.1.1.11
TC MGYG000004116_2 MGYG000004116_2_60 69610 70572 + 3.A.1.1.11
CAZyme MGYG000004116_2 MGYG000004116_2_61 70586 73069 + CBM67 | GH78
Gene ID: MGYG000004116_2_51
Type: TC
Location: 54279 - 55979 (+)
Gene ID: MGYG000004116_2_52
Type: TF
Location: 55979 - 57631 (+)
Gene ID: MGYG000004116_2_53
Type: TC
Location: 57814 - 59499 (+)
Gene ID: MGYG000004116_2_54
Type: STP
Location: 59606 - 62512 (+)
Gene ID: MGYG000004116_2_55
Type: TC
Location: 62505 - 63452 (+)
Gene ID: MGYG000004116_2_56
Type: TC
Location: 63454 - 64308 (+)
Gene ID: MGYG000004116_2_57
Type: pfam
Location: 64329 - 66455 (+)
Gene ID: MGYG000004116_2_58
Type: pfam
Location: 66500 - 68689 (+)
Gene ID: MGYG000004116_2_59
Type: TC
Location: 68705 - 69604 (+)
Gene ID: MGYG000004116_2_60
Type: TC
Location: 69610 - 70572 (+)
Gene ID: MGYG000004116_2_61
Type: CAZyme
Location: 70586 - 73069 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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