Cluster: MGYG000004116_CGC20
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004116
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004116_6 | MGYG000004116_6_50 | 78911 | 79825 | - | 3.A.1.1.10 |
| TC | MGYG000004116_6 | MGYG000004116_6_51 | 79839 | 80798 | - | 3.A.1.1.10 |
| TC | MGYG000004116_6 | MGYG000004116_6_52 | 80914 | 82470 | - | 3.A.1.1.10 |
| TF | MGYG000004116_6 | MGYG000004116_6_53 | 82677 | 84869 | + | HTH_AraC |
| TC | MGYG000004116_6 | MGYG000004116_6_54 | 85034 | 85990 | - | 3.A.1.1.11 |
| TC | MGYG000004116_6 | MGYG000004116_6_55 | 85980 | 86909 | - | 3.A.1.1.25 |
| pfam | MGYG000004116_6 | MGYG000004116_6_56 | 86914 | 89547 | - | DUF5696 |
| pfam | MGYG000004116_6 | MGYG000004116_6_57 | 89562 | 91685 | - | Yip1 |
| TC | MGYG000004116_6 | MGYG000004116_6_58 | 91706 | 92566 | - | 3.A.1.1.18 |
| TC | MGYG000004116_6 | MGYG000004116_6_59 | 92566 | 93465 | - | 3.A.1.1.11 |
| STP | MGYG000004116_6 | MGYG000004116_6_60 | 93509 | 96367 | - | SBP_bac_1 |
| CAZyme | MGYG000004116_6 | MGYG000004116_6_61 | 96384 | 98381 | - | GH31_4 |
| TF | MGYG000004116_6 | MGYG000004116_6_62 | 98544 | 99437 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000004116_6 | MGYG000004116_6_63 | 99434 | 100936 | - | GH51_1 |
| CAZyme | MGYG000004116_6 | MGYG000004116_6_64 | 100953 | 102857 | - | GH39 |
| CAZyme | MGYG000004116_6 | MGYG000004116_6_65 | 102888 | 104915 | - | GH39 |
| CAZyme | MGYG000004116_6 | MGYG000004116_6_66 | 105035 | 109426 | - | CE20 |
Gene ID: MGYG000004116_6_50
Type: TC
Location: 78911 - 79825 (-)
Type: TC
Location: 78911 - 79825 (-)
Gene ID: MGYG000004116_6_51
Type: TC
Location: 79839 - 80798 (-)
Type: TC
Location: 79839 - 80798 (-)
Gene ID: MGYG000004116_6_52
Type: TC
Location: 80914 - 82470 (-)
Type: TC
Location: 80914 - 82470 (-)
Gene ID: MGYG000004116_6_53
Type: TF
Location: 82677 - 84869 (+)
Type: TF
Location: 82677 - 84869 (+)
Gene ID: MGYG000004116_6_54
Type: TC
Location: 85034 - 85990 (-)
Type: TC
Location: 85034 - 85990 (-)
Gene ID: MGYG000004116_6_55
Type: TC
Location: 85980 - 86909 (-)
Type: TC
Location: 85980 - 86909 (-)
Gene ID: MGYG000004116_6_56
Type: pfam
Location: 86914 - 89547 (-)
Type: pfam
Location: 86914 - 89547 (-)
Gene ID: MGYG000004116_6_57
Type: pfam
Location: 89562 - 91685 (-)
Type: pfam
Location: 89562 - 91685 (-)
Gene ID: MGYG000004116_6_58
Type: TC
Location: 91706 - 92566 (-)
Type: TC
Location: 91706 - 92566 (-)
Gene ID: MGYG000004116_6_59
Type: TC
Location: 92566 - 93465 (-)
Type: TC
Location: 92566 - 93465 (-)
Gene ID: MGYG000004116_6_60
Type: STP
Location: 93509 - 96367 (-)
Type: STP
Location: 93509 - 96367 (-)
Gene ID: MGYG000004116_6_61
Type: CAZyme
Location: 96384 - 98381 (-)
Type: CAZyme
Location: 96384 - 98381 (-)
Gene ID: MGYG000004116_6_62
Type: TF
Location: 98544 - 99437 (+)
Type: TF
Location: 98544 - 99437 (+)
Gene ID: MGYG000004116_6_63
Type: CAZyme
Location: 99434 - 100936 (-)
Type: CAZyme
Location: 99434 - 100936 (-)
Gene ID: MGYG000004116_6_64
Type: CAZyme
Location: 100953 - 102857 (-)
Type: CAZyme
Location: 100953 - 102857 (-)
Gene ID: MGYG000004116_6_65
Type: CAZyme
Location: 102888 - 104915 (-)
Type: CAZyme
Location: 102888 - 104915 (-)
Gene ID: MGYG000004116_6_66
Type: CAZyme
Location: 105035 - 109426 (-)
Type: CAZyme
Location: 105035 - 109426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp902492455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.