Cluster: MGYG000004105_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004105
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004105_1 | MGYG000004105_1_173 | 211730 | 212491 | - | GT2 |
| NULL(UNKNOWN) | MGYG000004105_1 | MGYG000004105_1_174 | 212503 | 212787 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004105_1 | MGYG000004105_1_175 | 212968 | 214308 | + | 2.A.38.1.1 |
| pfam | MGYG000004105_1 | MGYG000004105_1_176 | 214317 | 215834 | + | GH3 | GH3_M | GH3_C |
| CAZyme | MGYG000004105_1 | MGYG000004105_1_177 | 215831 | 216991 | + | GT4 |
Gene ID: MGYG000004105_1_173
Type: CAZyme
Location: 211730 - 212491 (-)
Type: CAZyme
Location: 211730 - 212491 (-)
Gene ID: MGYG000004105_1_174
Type:
Location: 212503 - 212787 (-)
Type:
Location: 212503 - 212787 (-)
Gene ID: MGYG000004105_1_175
Type: TC
Location: 212968 - 214308 (+)
Type: TC
Location: 212968 - 214308 (+)
Gene ID: MGYG000004105_1_176
Type: pfam
Location: 214317 - 215834 (+)
Type: pfam
Location: 214317 - 215834 (+)
Gene ID: MGYG000004105_1_177
Type: CAZyme
Location: 215831 - 216991 (+)
Type: CAZyme
Location: 215831 - 216991 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.