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Cluster: MGYG000004105_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004105_5 MGYG000004105_5_157 191436 192752 - 2.A.23.1.2
pfam MGYG000004105_5 MGYG000004105_5_158 192887 194056 - Pect-lyase_RHGA_epim
TC MGYG000004105_5 MGYG000004105_5_159 194228 195511 + 9.B.196.1.2
CAZyme MGYG000004105_5 MGYG000004105_5_160 195632 198193 + GH3
pfam MGYG000004105_5 MGYG000004105_5_161 198320 201538 + MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C
TC MGYG000004105_5 MGYG000004105_5_162 201745 203211 - 1.I.1.1.3
CAZyme MGYG000004105_5 MGYG000004105_5_163 203265 205970 - CBM67 | GH78
NULL(UNKNOWN) MGYG000004105_5 MGYG000004105_5_164 206008 207282 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000004105_5 MGYG000004105_5_165 207497 209137 - GH78
Gene ID: MGYG000004105_5_157
Type: TC
Location: 191436 - 192752 (-)
Gene ID: MGYG000004105_5_158
Type: pfam
Location: 192887 - 194056 (-)
Gene ID: MGYG000004105_5_159
Type: TC
Location: 194228 - 195511 (+)
Gene ID: MGYG000004105_5_160
Type: CAZyme
Location: 195632 - 198193 (+)
Gene ID: MGYG000004105_5_161
Type: pfam
Location: 198320 - 201538 (+)
Gene ID: MGYG000004105_5_162
Type: TC
Location: 201745 - 203211 (-)
Gene ID: MGYG000004105_5_163
Type: CAZyme
Location: 203265 - 205970 (-)
Gene ID: MGYG000004105_5_164
Type:
Location: 206008 - 207282 (-)
Gene ID: MGYG000004105_5_165
Type: CAZyme
Location: 207497 - 209137 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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