Cluster: MGYG000004105_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004105
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004105_1 | MGYG000004105_1_40 | 37863 | 40106 | + | 2.A.37.1.5 |
| pfam | MGYG000004105_1 | MGYG000004105_1_41 | 40283 | 41731 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000004105_1 | MGYG000004105_1_42 | 41765 | 43012 | + | 9.B.146.1.6 |
| pfam | MGYG000004105_1 | MGYG000004105_1_43 | 43015 | 44355 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | MGYG000004105_1 | MGYG000004105_1_44 | 44371 | 45657 | + | 2.A.103.1.3 |
| CAZyme | MGYG000004105_1 | MGYG000004105_1_45 | 45693 | 46805 | + | GT28 |
Gene ID: MGYG000004105_1_40
Type: TC
Location: 37863 - 40106 (+)
Type: TC
Location: 37863 - 40106 (+)
Gene ID: MGYG000004105_1_41
Type: pfam
Location: 40283 - 41731 (+)
Type: pfam
Location: 40283 - 41731 (+)
Gene ID: MGYG000004105_1_42
Type: TC
Location: 41765 - 43012 (+)
Type: TC
Location: 41765 - 43012 (+)
Gene ID: MGYG000004105_1_43
Type: pfam
Location: 43015 - 44355 (+)
Type: pfam
Location: 43015 - 44355 (+)
Gene ID: MGYG000004105_1_44
Type: TC
Location: 44371 - 45657 (+)
Type: TC
Location: 44371 - 45657 (+)
Gene ID: MGYG000004105_1_45
Type: CAZyme
Location: 45693 - 46805 (+)
Type: CAZyme
Location: 45693 - 46805 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.