Cluster: MGYG000004097_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004097
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004097_2 | MGYG000004097_2_105 | 110420 | 111346 | - | CE7 |
| TC | MGYG000004097_2 | MGYG000004097_2_106 | 111478 | 112305 | - | 3.A.1.5.27 |
| TC | MGYG000004097_2 | MGYG000004097_2_107 | 112306 | 114321 | - | 3.A.1.5.25 |
| TC | MGYG000004097_2 | MGYG000004097_2_108 | 114325 | 115281 | - | 3.A.1.5.38 |
| TC | MGYG000004097_2 | MGYG000004097_2_109 | 115437 | 117050 | - | 3.A.1.5.27 |
| pfam | MGYG000004097_2 | MGYG000004097_2_110 | 117416 | 119356 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | MGYG000004097_2 | MGYG000004097_2_111 | 119363 | 121666 | - | 2.A.66.4.4 |
Gene ID: MGYG000004097_2_105
Type: CAZyme
Location: 110420 - 111346 (-)
Type: CAZyme
Location: 110420 - 111346 (-)
Gene ID: MGYG000004097_2_106
Type: TC
Location: 111478 - 112305 (-)
Type: TC
Location: 111478 - 112305 (-)
Gene ID: MGYG000004097_2_107
Type: TC
Location: 112306 - 114321 (-)
Type: TC
Location: 112306 - 114321 (-)
Gene ID: MGYG000004097_2_108
Type: TC
Location: 114325 - 115281 (-)
Type: TC
Location: 114325 - 115281 (-)
Gene ID: MGYG000004097_2_109
Type: TC
Location: 115437 - 117050 (-)
Type: TC
Location: 115437 - 117050 (-)
Gene ID: MGYG000004097_2_110
Type: pfam
Location: 117416 - 119356 (-)
Type: pfam
Location: 117416 - 119356 (-)
Gene ID: MGYG000004097_2_111
Type: TC
Location: 119363 - 121666 (-)
Type: TC
Location: 119363 - 121666 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902492235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.