Cluster: MGYG000004097_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004097
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004097_1 | MGYG000004097_1_111 | 126302 | 127042 | + | 9.B.18.1.2 |
| NULL(UNKNOWN) | MGYG000004097_1 | MGYG000004097_1_112 | 126884 | 127384 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004097_1 | MGYG000004097_1_113 | 128082 | 129182 | + | GT2 |
| pfam | MGYG000004097_1 | MGYG000004097_1_114 | 129182 | 130282 | + | PS_pyruv_trans |
| CAZyme | MGYG000004097_1 | MGYG000004097_1_115 | 130283 | 131383 | + | GT4 |
| pfam | MGYG000004097_1 | MGYG000004097_1_116 | 131376 | 132608 | + | Wzy_C |
| CAZyme | MGYG000004097_1 | MGYG000004097_1_117 | 132595 | 133578 | + | GT2 |
Gene ID: MGYG000004097_1_111
Type: TC
Location: 126302 - 127042 (+)
Type: TC
Location: 126302 - 127042 (+)
Gene ID: MGYG000004097_1_112
Type:
Location: 126884 - 127384 (-)
Type:
Location: 126884 - 127384 (-)
Gene ID: MGYG000004097_1_113
Type: CAZyme
Location: 128082 - 129182 (+)
Type: CAZyme
Location: 128082 - 129182 (+)
Gene ID: MGYG000004097_1_114
Type: pfam
Location: 129182 - 130282 (+)
Type: pfam
Location: 129182 - 130282 (+)
Gene ID: MGYG000004097_1_115
Type: CAZyme
Location: 130283 - 131383 (+)
Type: CAZyme
Location: 130283 - 131383 (+)
Gene ID: MGYG000004097_1_116
Type: pfam
Location: 131376 - 132608 (+)
Type: pfam
Location: 131376 - 132608 (+)
Gene ID: MGYG000004097_1_117
Type: CAZyme
Location: 132595 - 133578 (+)
Type: CAZyme
Location: 132595 - 133578 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902492235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.