Cluster: MGYG000004091_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004091
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004091_16 | MGYG000004091_16_4 | 2614 | 3990 | - | GH13_20 |
| TC | MGYG000004091_16 | MGYG000004091_16_5 | 4145 | 5341 | - | 2.A.1.2.18 |
| TC | MGYG000004091_16 | MGYG000004091_16_6 | 5463 | 7823 | - | 9.A.8.1.6 |
| peptidase | MGYG000004091_16 | MGYG000004091_16_7 | 8008 | 8910 | - | S09.UPW |
| TC | MGYG000004091_16 | MGYG000004091_16_8 | 9155 | 9718 | + | 4.A.1.2.6 |
| pfam | MGYG000004091_16 | MGYG000004091_16_9 | 9899 | 11302 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000004091_16 | MGYG000004091_16_10 | 11561 | 12343 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004091_16 | MGYG000004091_16_11 | 12503 | 13468 | + | 3.A.1.34.1 |
| TC | MGYG000004091_16 | MGYG000004091_16_12 | 13673 | 14596 | + | 3.A.1.34.1 |
| TC | MGYG000004091_16 | MGYG000004091_16_13 | 14589 | 15383 | + | 3.A.1.34.1 |
Gene ID: MGYG000004091_16_4
Type: CAZyme
Location: 2614 - 3990 (-)
Type: CAZyme
Location: 2614 - 3990 (-)
Gene ID: MGYG000004091_16_5
Type: TC
Location: 4145 - 5341 (-)
Type: TC
Location: 4145 - 5341 (-)
Gene ID: MGYG000004091_16_6
Type: TC
Location: 5463 - 7823 (-)
Type: TC
Location: 5463 - 7823 (-)
Gene ID: MGYG000004091_16_7
Type: peptidase
Location: 8008 - 8910 (-)
Type: peptidase
Location: 8008 - 8910 (-)
Gene ID: MGYG000004091_16_8
Type: TC
Location: 9155 - 9718 (+)
Type: TC
Location: 9155 - 9718 (+)
Gene ID: MGYG000004091_16_9
Type: pfam
Location: 9899 - 11302 (+)
Type: pfam
Location: 9899 - 11302 (+)
Gene ID: MGYG000004091_16_10
Type:
Location: 11561 - 12343 (+)
Type:
Location: 11561 - 12343 (+)
Gene ID: MGYG000004091_16_11
Type: TC
Location: 12503 - 13468 (+)
Type: TC
Location: 12503 - 13468 (+)
Gene ID: MGYG000004091_16_12
Type: TC
Location: 13673 - 14596 (+)
Type: TC
Location: 13673 - 14596 (+)
Gene ID: MGYG000004091_16_13
Type: TC
Location: 14589 - 15383 (+)
Type: TC
Location: 14589 - 15383 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902492185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.