Cluster: MGYG000004090_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004090
- CGC Family ID: CGCFAM_01908
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004090_2 | MGYG000004090_2_125 | 158654 | 159439 | + | 1.B.18.3.3 |
| TC | MGYG000004090_2 | MGYG000004090_2_126 | 159455 | 161899 | + | 8.A.3.3.4 |
| pfam | MGYG000004090_2 | MGYG000004090_2_127 | 161886 | 163394 | + | MatE |
| CAZyme | MGYG000004090_2 | MGYG000004090_2_128 | 163391 | 164437 | + | GT4 |
| NULL(UNKNOWN) | MGYG000004090_2 | MGYG000004090_2_129 | 164424 | 165701 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004090_2 | MGYG000004090_2_130 | 165640 | 166509 | + | Glycos_transf_2 |
| CAZyme | MGYG000004090_2 | MGYG000004090_2_131 | 166509 | 167435 | + | GT2 |
| NULL(UNKNOWN) | MGYG000004090_2 | MGYG000004090_2_132 | 167398 | 167781 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000004090_2 | MGYG000004090_2_133 | 167913 | 168080 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004090_2 | MGYG000004090_2_134 | 168098 | 169216 | + | GT4 |
| pfam | MGYG000004090_2 | MGYG000004090_2_135 | 169194 | 169784 | + | Hexapep | Hexapep_2 |
| pfam | MGYG000004090_2 | MGYG000004090_2_136 | 169789 | 170325 | + | Hexapep |
| CAZyme | MGYG000004090_2 | MGYG000004090_2_137 | 170330 | 171211 | + | GT2 |
| CAZyme | MGYG000004090_2 | MGYG000004090_2_138 | 171215 | 173035 | + | GT2 |
| TC | MGYG000004090_2 | MGYG000004090_2_139 | 173083 | 173688 | + | 9.B.18.1.1 |
| NULL(UNKNOWN) | MGYG000004090_2 | MGYG000004090_2_140 | 173727 | 175502 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004090_2 | MGYG000004090_2_141 | 175592 | 177649 | + | 3.A.1.117.3 |
Gene ID: MGYG000004090_2_125
Type: TC
Location: 158654 - 159439 (+)
Type: TC
Location: 158654 - 159439 (+)
Gene ID: MGYG000004090_2_126
Type: TC
Location: 159455 - 161899 (+)
Type: TC
Location: 159455 - 161899 (+)
Gene ID: MGYG000004090_2_127
Type: pfam
Location: 161886 - 163394 (+)
Type: pfam
Location: 161886 - 163394 (+)
Gene ID: MGYG000004090_2_128
Type: CAZyme
Location: 163391 - 164437 (+)
Type: CAZyme
Location: 163391 - 164437 (+)
Gene ID: MGYG000004090_2_129
Type:
Location: 164424 - 165701 (+)
Type:
Location: 164424 - 165701 (+)
Gene ID: MGYG000004090_2_130
Type: pfam
Location: 165640 - 166509 (+)
Type: pfam
Location: 165640 - 166509 (+)
Gene ID: MGYG000004090_2_131
Type: CAZyme
Location: 166509 - 167435 (+)
Type: CAZyme
Location: 166509 - 167435 (+)
Gene ID: MGYG000004090_2_132
Type:
Location: 167398 - 167781 (+)
Type:
Location: 167398 - 167781 (+)
Gene ID: MGYG000004090_2_133
Type:
Location: 167913 - 168080 (+)
Type:
Location: 167913 - 168080 (+)
Gene ID: MGYG000004090_2_134
Type: CAZyme
Location: 168098 - 169216 (+)
Type: CAZyme
Location: 168098 - 169216 (+)
Gene ID: MGYG000004090_2_135
Type: pfam
Location: 169194 - 169784 (+)
Type: pfam
Location: 169194 - 169784 (+)
Gene ID: MGYG000004090_2_136
Type: pfam
Location: 169789 - 170325 (+)
Type: pfam
Location: 169789 - 170325 (+)
Gene ID: MGYG000004090_2_137
Type: CAZyme
Location: 170330 - 171211 (+)
Type: CAZyme
Location: 170330 - 171211 (+)
Gene ID: MGYG000004090_2_138
Type: CAZyme
Location: 171215 - 173035 (+)
Type: CAZyme
Location: 171215 - 173035 (+)
Gene ID: MGYG000004090_2_139
Type: TC
Location: 173083 - 173688 (+)
Type: TC
Location: 173083 - 173688 (+)
Gene ID: MGYG000004090_2_140
Type:
Location: 173727 - 175502 (+)
Type:
Location: 173727 - 175502 (+)
Gene ID: MGYG000004090_2_141
Type: TC
Location: 175592 - 177649 (+)
Type: TC
Location: 175592 - 177649 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.