Cluster: MGYG000004090_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004090
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004090_27 | MGYG000004090_27_22 | 19659 | 19892 | + | 3.D.1.6.3 |
| pfam | MGYG000004090_27 | MGYG000004090_27_23 | 19907 | 21172 | + | ketoacyl-synt | Ketoacyl-synt_C |
| pfam | MGYG000004090_27 | MGYG000004090_27_24 | 21189 | 21980 | + | dsrm | Ribonuclease_3 | Ribonucleas_3_3 |
| CAZyme | MGYG000004090_27 | MGYG000004090_27_25 | 22047 | 24659 | + | GH13_42 |
Gene ID: MGYG000004090_27_22
Type: TC
Location: 19659 - 19892 (+)
Type: TC
Location: 19659 - 19892 (+)
Gene ID: MGYG000004090_27_23
Type: pfam
Location: 19907 - 21172 (+)
Type: pfam
Location: 19907 - 21172 (+)
Gene ID: MGYG000004090_27_24
Type: pfam
Location: 21189 - 21980 (+)
Type: pfam
Location: 21189 - 21980 (+)
Gene ID: MGYG000004090_27_25
Type: CAZyme
Location: 22047 - 24659 (+)
Type: CAZyme
Location: 22047 - 24659 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004090_27_22 | vegan > omnivore | 1.40454 | 0.01054 |
| MGYG000004090_27_22 | vegan > vegetarian | 2.68315 | 0.02681 |