Cluster: MGYG000004090_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004090
- CGC Family ID: CGCFAM_00275
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004090_1 | MGYG000004090_1_139 | 149930 | 151588 | + | 2.A.1.53.5 |
| pfam | MGYG000004090_1 | MGYG000004090_1_140 | 151722 | 152789 | + | Aminotran_5 |
| pfam | MGYG000004090_1 | MGYG000004090_1_141 | 152795 | 153712 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| CAZyme | MGYG000004090_1 | MGYG000004090_1_142 | 153792 | 155219 | - | GH30_1 |
| CAZyme | MGYG000004090_1 | MGYG000004090_1_143 | 155237 | 156421 | - | GH172 |
| CAZyme | MGYG000004090_1 | MGYG000004090_1_144 | 156544 | 158820 | - | GH3 |
| CAZyme | MGYG000004090_1 | MGYG000004090_1_145 | 158841 | 160220 | - | GH144 |
| CAZyme | MGYG000004090_1 | MGYG000004090_1_146 | 160233 | 162368 | - | CBM32 | GH43_28 |
| pfam | MGYG000004090_1 | MGYG000004090_1_147 | 162498 | 164045 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000004090_1 | MGYG000004090_1_148 | 164074 | 167112 | - | 1.B.14.6.1 |
Gene ID: MGYG000004090_1_139
Type: TC
Location: 149930 - 151588 (+)
Type: TC
Location: 149930 - 151588 (+)
Gene ID: MGYG000004090_1_140
Type: pfam
Location: 151722 - 152789 (+)
Type: pfam
Location: 151722 - 152789 (+)
Gene ID: MGYG000004090_1_141
Type: pfam
Location: 152795 - 153712 (+)
Type: pfam
Location: 152795 - 153712 (+)
Gene ID: MGYG000004090_1_142
Type: CAZyme
Location: 153792 - 155219 (-)
Type: CAZyme
Location: 153792 - 155219 (-)
Gene ID: MGYG000004090_1_143
Type: CAZyme
Location: 155237 - 156421 (-)
Type: CAZyme
Location: 155237 - 156421 (-)
Gene ID: MGYG000004090_1_144
Type: CAZyme
Location: 156544 - 158820 (-)
Type: CAZyme
Location: 156544 - 158820 (-)
Gene ID: MGYG000004090_1_145
Type: CAZyme
Location: 158841 - 160220 (-)
Type: CAZyme
Location: 158841 - 160220 (-)
Gene ID: MGYG000004090_1_146
Type: CAZyme
Location: 160233 - 162368 (-)
Type: CAZyme
Location: 160233 - 162368 (-)
Gene ID: MGYG000004090_1_147
Type: pfam
Location: 162498 - 164045 (-)
Type: pfam
Location: 162498 - 164045 (-)
Gene ID: MGYG000004090_1_148
Type: TC
Location: 164074 - 167112 (-)
Type: TC
Location: 164074 - 167112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.