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Cluster: MGYG000004090_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004090_8 MGYG000004090_8_31 40516 41664 - 2.A.1.7.17
CAZyme MGYG000004090_8 MGYG000004090_8_32 41667 43478 - GH32
CAZyme MGYG000004090_8 MGYG000004090_8_33 43494 45974 - GH32
pfam MGYG000004090_8 MGYG000004090_8_34 46042 47226 - DUF4960
pfam MGYG000004090_8 MGYG000004090_8_35 47239 48915 - SusD_RagB | SusD-like_3
TC MGYG000004090_8 MGYG000004090_8_36 48949 51999 - 1.B.14.6.1
pfam MGYG000004090_8 MGYG000004090_8_37 52222 53562 + PTR2 | MFS_1
TC MGYG000004090_8 MGYG000004090_8_38 53566 55017 + 2.A.36.6.11
Gene ID: MGYG000004090_8_31
Type: TC
Location: 40516 - 41664 (-)
Gene ID: MGYG000004090_8_32
Type: CAZyme
Location: 41667 - 43478 (-)
Gene ID: MGYG000004090_8_33
Type: CAZyme
Location: 43494 - 45974 (-)
Gene ID: MGYG000004090_8_34
Type: pfam
Location: 46042 - 47226 (-)
Gene ID: MGYG000004090_8_35
Type: pfam
Location: 47239 - 48915 (-)
Gene ID: MGYG000004090_8_36
Type: TC
Location: 48949 - 51999 (-)
Gene ID: MGYG000004090_8_37
Type: pfam
Location: 52222 - 53562 (+)
Gene ID: MGYG000004090_8_38
Type: TC
Location: 53566 - 55017 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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