Cluster: MGYG000004085_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004085
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004085_12 | MGYG000004085_12_19 | 13144 | 14697 | - | 2.A.21.2.3 |
| pfam | MGYG000004085_12 | MGYG000004085_12_20 | 14870 | 15367 | + | RecX_HTH2 | RecX_HTH1 |
| pfam | MGYG000004085_12 | MGYG000004085_12_21 | 15351 | 16688 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | MGYG000004085_12 | MGYG000004085_12_22 | 16685 | 17236 | + | 4.F.1.1.7 |
| CAZyme | MGYG000004085_12 | MGYG000004085_12_23 | 17249 | 18247 | + | GT2 |
| pfam | MGYG000004085_12 | MGYG000004085_12_24 | 18267 | 19793 | + | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | MGYG000004085_12 | MGYG000004085_12_25 | 19798 | 20784 | + | GT2 |
Gene ID: MGYG000004085_12_19
Type: TC
Location: 13144 - 14697 (-)
Type: TC
Location: 13144 - 14697 (-)
Gene ID: MGYG000004085_12_20
Type: pfam
Location: 14870 - 15367 (+)
Type: pfam
Location: 14870 - 15367 (+)
Gene ID: MGYG000004085_12_21
Type: pfam
Location: 15351 - 16688 (+)
Type: pfam
Location: 15351 - 16688 (+)
Gene ID: MGYG000004085_12_22
Type: TC
Location: 16685 - 17236 (+)
Type: TC
Location: 16685 - 17236 (+)
Gene ID: MGYG000004085_12_23
Type: CAZyme
Location: 17249 - 18247 (+)
Type: CAZyme
Location: 17249 - 18247 (+)
Gene ID: MGYG000004085_12_24
Type: pfam
Location: 18267 - 19793 (+)
Type: pfam
Location: 18267 - 19793 (+)
Gene ID: MGYG000004085_12_25
Type: CAZyme
Location: 19798 - 20784 (+)
Type: CAZyme
Location: 19798 - 20784 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp902492065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.