Cluster: MGYG000004085_CGC29
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004085
- CGC Family ID: CGCFAM_04778
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004085_10 | MGYG000004085_10_32 | 33541 | 34803 | - | GT2 |
| STP | MGYG000004085_10 | MGYG000004085_10_33 | 35408 | 37114 | + | Peptidase_M23 |
| NULL(UNKNOWN) | MGYG000004085_10 | MGYG000004085_10_34 | 37373 | 37546 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004085_10 | MGYG000004085_10_35 | 37919 | 40546 | - | 4.A.2.1.17 |
| STP | MGYG000004085_10 | MGYG000004085_10_36 | 40987 | 42180 | + | Aminotran_1_2 |
| pfam | MGYG000004085_10 | MGYG000004085_10_37 | 42204 | 43205 | + | tRNA-synt_1b |
| TC | MGYG000004085_10 | MGYG000004085_10_38 | 43254 | 44399 | + | 9.B.146.1.1 |
| pfam | MGYG000004085_10 | MGYG000004085_10_39 | 44413 | 45564 | + | Epimerase_2 |
| NULL(UNKNOWN) | MGYG000004085_10 | MGYG000004085_10_40 | 45617 | 45928 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004085_10 | MGYG000004085_10_41 | 45929 | 47911 | + | 3.A.2.2.2 |
| TC | MGYG000004085_10 | MGYG000004085_10_42 | 47957 | 48454 | + | 3.A.2.2.2 |
| pfam | MGYG000004085_10 | MGYG000004085_10_43 | 48500 | 49093 | + | vATP-synt_E |
| pfam | MGYG000004085_10 | MGYG000004085_10_44 | 49108 | 50100 | + | vATP-synt_AC39 |
| TC | MGYG000004085_10 | MGYG000004085_10_45 | 50093 | 50416 | + | 3.A.2.2.2 |
| TC | MGYG000004085_10 | MGYG000004085_10_46 | 50468 | 52237 | + | 3.A.2.2.2 |
| TC | MGYG000004085_10 | MGYG000004085_10_47 | 52239 | 53630 | + | 3.A.2.2.2 |
| TC | MGYG000004085_10 | MGYG000004085_10_48 | 53634 | 54299 | + | 3.A.2.2.2 |
Gene ID: MGYG000004085_10_32
Type: CAZyme
Location: 33541 - 34803 (-)
Type: CAZyme
Location: 33541 - 34803 (-)
Gene ID: MGYG000004085_10_33
Type: STP
Location: 35408 - 37114 (+)
Type: STP
Location: 35408 - 37114 (+)
Gene ID: MGYG000004085_10_34
Type:
Location: 37373 - 37546 (-)
Type:
Location: 37373 - 37546 (-)
Gene ID: MGYG000004085_10_35
Type: TC
Location: 37919 - 40546 (-)
Type: TC
Location: 37919 - 40546 (-)
Gene ID: MGYG000004085_10_36
Type: STP
Location: 40987 - 42180 (+)
Type: STP
Location: 40987 - 42180 (+)
Gene ID: MGYG000004085_10_37
Type: pfam
Location: 42204 - 43205 (+)
Type: pfam
Location: 42204 - 43205 (+)
Gene ID: MGYG000004085_10_38
Type: TC
Location: 43254 - 44399 (+)
Type: TC
Location: 43254 - 44399 (+)
Gene ID: MGYG000004085_10_39
Type: pfam
Location: 44413 - 45564 (+)
Type: pfam
Location: 44413 - 45564 (+)
Gene ID: MGYG000004085_10_40
Type:
Location: 45617 - 45928 (+)
Type:
Location: 45617 - 45928 (+)
Gene ID: MGYG000004085_10_41
Type: TC
Location: 45929 - 47911 (+)
Type: TC
Location: 45929 - 47911 (+)
Gene ID: MGYG000004085_10_42
Type: TC
Location: 47957 - 48454 (+)
Type: TC
Location: 47957 - 48454 (+)
Gene ID: MGYG000004085_10_43
Type: pfam
Location: 48500 - 49093 (+)
Type: pfam
Location: 48500 - 49093 (+)
Gene ID: MGYG000004085_10_44
Type: pfam
Location: 49108 - 50100 (+)
Type: pfam
Location: 49108 - 50100 (+)
Gene ID: MGYG000004085_10_45
Type: TC
Location: 50093 - 50416 (+)
Type: TC
Location: 50093 - 50416 (+)
Gene ID: MGYG000004085_10_46
Type: TC
Location: 50468 - 52237 (+)
Type: TC
Location: 50468 - 52237 (+)
Gene ID: MGYG000004085_10_47
Type: TC
Location: 52239 - 53630 (+)
Type: TC
Location: 52239 - 53630 (+)
Gene ID: MGYG000004085_10_48
Type: TC
Location: 53634 - 54299 (+)
Type: TC
Location: 53634 - 54299 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp902492065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.