Cluster: MGYG000004085_CGC21
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004085
- CGC Family ID: CGCFAM_06140
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004085_4 | MGYG000004085_4_26 | 27354 | 27890 | + | 3.A.1.25.4 |
| TC | MGYG000004085_4 | MGYG000004085_4_27 | 28023 | 29372 | + | 2.A.66.1.26 |
| pfam | MGYG000004085_4 | MGYG000004085_4_28 | 29476 | 30048 | + | HAD |
| pfam | MGYG000004085_4 | MGYG000004085_4_29 | 30194 | 30676 | + | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TC | MGYG000004085_4 | MGYG000004085_4_30 | 30695 | 32212 | + | 2.A.35.2.1 |
| TC | MGYG000004085_4 | MGYG000004085_4_31 | 32066 | 33142 | - | 3.A.11.1.4 |
| pfam | MGYG000004085_4 | MGYG000004085_4_32 | 33269 | 34168 | + | Radical_SAM |
| sulfatase | MGYG000004085_4 | MGYG000004085_4_33 | 34235 | 35440 | + | S1_14 |
| CAZyme | MGYG000004085_4 | MGYG000004085_4_34 | 35579 | 36352 | + | CE4 |
| TC | MGYG000004085_4 | MGYG000004085_4_35 | 36387 | 36947 | - | 2.A.107.1.2 |
| pfam | MGYG000004085_4 | MGYG000004085_4_36 | 37164 | 38273 | - | APH |
| TF | MGYG000004085_4 | MGYG000004085_4_37 | 38432 | 39322 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000004085_4 | MGYG000004085_4_38 | 39388 | 39942 | + | 2.A.107.1.2 |
Gene ID: MGYG000004085_4_26
Type: TC
Location: 27354 - 27890 (+)
Type: TC
Location: 27354 - 27890 (+)
Gene ID: MGYG000004085_4_27
Type: TC
Location: 28023 - 29372 (+)
Type: TC
Location: 28023 - 29372 (+)
Gene ID: MGYG000004085_4_28
Type: pfam
Location: 29476 - 30048 (+)
Type: pfam
Location: 29476 - 30048 (+)
Gene ID: MGYG000004085_4_29
Type: pfam
Location: 30194 - 30676 (+)
Type: pfam
Location: 30194 - 30676 (+)
Gene ID: MGYG000004085_4_30
Type: TC
Location: 30695 - 32212 (+)
Type: TC
Location: 30695 - 32212 (+)
Gene ID: MGYG000004085_4_31
Type: TC
Location: 32066 - 33142 (-)
Type: TC
Location: 32066 - 33142 (-)
Gene ID: MGYG000004085_4_32
Type: pfam
Location: 33269 - 34168 (+)
Type: pfam
Location: 33269 - 34168 (+)
Gene ID: MGYG000004085_4_33
Type: sulfatase
Location: 34235 - 35440 (+)
Type: sulfatase
Location: 34235 - 35440 (+)
Gene ID: MGYG000004085_4_34
Type: CAZyme
Location: 35579 - 36352 (+)
Type: CAZyme
Location: 35579 - 36352 (+)
Gene ID: MGYG000004085_4_35
Type: TC
Location: 36387 - 36947 (-)
Type: TC
Location: 36387 - 36947 (-)
Gene ID: MGYG000004085_4_36
Type: pfam
Location: 37164 - 38273 (-)
Type: pfam
Location: 37164 - 38273 (-)
Gene ID: MGYG000004085_4_37
Type: TF
Location: 38432 - 39322 (+)
Type: TF
Location: 38432 - 39322 (+)
Gene ID: MGYG000004085_4_38
Type: TC
Location: 39388 - 39942 (+)
Type: TC
Location: 39388 - 39942 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp902492065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.