Cluster: MGYG000004059_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004059_5 | MGYG000004059_5_50 | 48655 | 49920 | - | 2.A.56.1.1 |
| pfam | MGYG000004059_5 | MGYG000004059_5_51 | 49917 | 50426 | - | DctQ |
| STP | MGYG000004059_5 | MGYG000004059_5_52 | 50492 | 50905 | - | DctP |
| TC | MGYG000004059_5 | MGYG000004059_5_53 | 50892 | 51545 | - | 2.A.56.1.2 |
| pfam | MGYG000004059_5 | MGYG000004059_5_54 | 51595 | 52785 | - | CoA_transf_3 |
| CAZyme | MGYG000004059_5 | MGYG000004059_5_55 | 52814 | 53929 | - | GH88 |
Gene ID: MGYG000004059_5_50
Type: TC
Location: 48655 - 49920 (-)
Type: TC
Location: 48655 - 49920 (-)
Gene ID: MGYG000004059_5_51
Type: pfam
Location: 49917 - 50426 (-)
Type: pfam
Location: 49917 - 50426 (-)
Gene ID: MGYG000004059_5_52
Type: STP
Location: 50492 - 50905 (-)
Type: STP
Location: 50492 - 50905 (-)
Gene ID: MGYG000004059_5_53
Type: TC
Location: 50892 - 51545 (-)
Type: TC
Location: 50892 - 51545 (-)
Gene ID: MGYG000004059_5_54
Type: pfam
Location: 51595 - 52785 (-)
Type: pfam
Location: 51595 - 52785 (-)
Gene ID: MGYG000004059_5_55
Type: CAZyme
Location: 52814 - 53929 (-)
Type: CAZyme
Location: 52814 - 53929 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp003150355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004059_5_50 | vegetarian > omnivore | 1.76590 | 0.00029 |
| MGYG000004059_5_51 | vegetarian > omnivore | 4.55639 | 0.00029 |
| MGYG000004059_5_52 | vegetarian > omnivore | 3.23691 | 0.00029 |
| MGYG000004059_5_52 | vegetarian > vegan | 1.07077 | 0.01057 |
| MGYG000004059_5_53 | vegetarian > omnivore | 2.83298 | 0.00029 |
| MGYG000004059_5_53 | vegetarian > vegan | 1.24959 | 0.01057 |
| MGYG000004059_5_54 | vegetarian > omnivore | 1.95518 | 0.00029 |
| MGYG000004059_5_54 | vegetarian > vegan | 2.04263 | 0.01057 |
| MGYG000004059_5_55 | vegetarian > omnivore | 3.54976 | 0.00029 |
| MGYG000004059_5_55 | vegetarian > vegan | 1.31448 | 0.01057 |