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Cluster: MGYG000004059_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004059_4 MGYG000004059_4_14 10266 13025 - 9.B.74.1.3
NULL(UNKNOWN) MGYG000004059_4 MGYG000004059_4_15 13022 13726 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004059_4 MGYG000004059_4_16 13766 15817 - 9.B.74.1.1
TC MGYG000004059_4 MGYG000004059_4_17 16158 16772 + 9.B.18.1.2
pfam MGYG000004059_4 MGYG000004059_4_18 16769 17656 + Epimerase | NmrA | NAD_binding_10
CAZyme MGYG000004059_4 MGYG000004059_4_19 17646 18740 + GT4
pfam MGYG000004059_4 MGYG000004059_4_20 18737 19297 + Hexapep | Hexapep_2
CAZyme MGYG000004059_4 MGYG000004059_4_21 19297 20400 + GT4
pfam MGYG000004059_4 MGYG000004059_4_22 20397 21137 + DUF2334
CAZyme MGYG000004059_4 MGYG000004059_4_23 21134 22231 + GT4
pfam MGYG000004059_4 MGYG000004059_4_24 22235 23152 + ATPgrasp_TupA
CAZyme MGYG000004059_4 MGYG000004059_4_25 23149 24213 + GT2
TC MGYG000004059_4 MGYG000004059_4_26 24230 25699 + 2.A.66.2.23
pfam MGYG000004059_4 MGYG000004059_4_27 25689 26258 + Hexapep | Hexapep_2
NULL(UNKNOWN) MGYG000004059_4 MGYG000004059_4_28 26276 27295 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004059_4 MGYG000004059_4_29 27285 28721 + 2.A.50.2.1
Gene ID: MGYG000004059_4_14
Type: TC
Location: 10266 - 13025 (-)
Gene ID: MGYG000004059_4_15
Type:
Location: 13022 - 13726 (-)
Gene ID: MGYG000004059_4_16
Type: TC
Location: 13766 - 15817 (-)
Gene ID: MGYG000004059_4_17
Type: TC
Location: 16158 - 16772 (+)
Gene ID: MGYG000004059_4_18
Type: pfam
Location: 16769 - 17656 (+)
Gene ID: MGYG000004059_4_19
Type: CAZyme
Location: 17646 - 18740 (+)
Gene ID: MGYG000004059_4_20
Type: pfam
Location: 18737 - 19297 (+)
Gene ID: MGYG000004059_4_21
Type: CAZyme
Location: 19297 - 20400 (+)
Gene ID: MGYG000004059_4_22
Type: pfam
Location: 20397 - 21137 (+)
Gene ID: MGYG000004059_4_23
Type: CAZyme
Location: 21134 - 22231 (+)
Gene ID: MGYG000004059_4_24
Type: pfam
Location: 22235 - 23152 (+)
Gene ID: MGYG000004059_4_25
Type: CAZyme
Location: 23149 - 24213 (+)
Gene ID: MGYG000004059_4_26
Type: TC
Location: 24230 - 25699 (+)
Gene ID: MGYG000004059_4_27
Type: pfam
Location: 25689 - 26258 (+)
Gene ID: MGYG000004059_4_28
Type:
Location: 26276 - 27295 (+)
Gene ID: MGYG000004059_4_29
Type: TC
Location: 27285 - 28721 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004059_4_14 vegetarian > omnivore 1.20688 0.00029
MGYG000004059_4_15 vegetarian > omnivore 2.39690 0.00029
MGYG000004059_4_16 vegetarian > omnivore 2.65397 0.00029
MGYG000004059_4_17 vegetarian > omnivore 1.25926 0.00029
MGYG000004059_4_18 vegetarian > omnivore 1.93917 0.00029
MGYG000004059_4_19 vegetarian > omnivore 2.44317 0.00029
MGYG000004059_4_20 vegetarian > omnivore 2.80973 0.00029
MGYG000004059_4_21 vegetarian > omnivore 1.80260 0.00029
MGYG000004059_4_23 vegetarian > omnivore 1.89512 0.00029
MGYG000004059_4_26 vegetarian > omnivore 2.66603 0.00029
MGYG000004059_4_29 vegetarian > omnivore 2.86033 0.00029

🧭 Explore Read Mapping of CGC

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