Cluster: MGYG000004059_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004059_3 | MGYG000004059_3_49 | 54247 | 55254 | + | 9.B.146.1.6 |
| TC | MGYG000004059_3 | MGYG000004059_3_50 | 55291 | 56448 | + | 2.A.103.1.3 |
| CAZyme | MGYG000004059_3 | MGYG000004059_3_51 | 56471 | 57595 | + | GT28 |
Gene ID: MGYG000004059_3_49
Type: TC
Location: 54247 - 55254 (+)
Type: TC
Location: 54247 - 55254 (+)
Gene ID: MGYG000004059_3_50
Type: TC
Location: 55291 - 56448 (+)
Type: TC
Location: 55291 - 56448 (+)
Gene ID: MGYG000004059_3_51
Type: CAZyme
Location: 56471 - 57595 (+)
Type: CAZyme
Location: 56471 - 57595 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp003150355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004059_3_50 | vegetarian > omnivore | 1.69318 | 0.00029 |
| MGYG000004059_3_51 | vegetarian > omnivore | 1.77246 | 0.00029 |