Cluster: MGYG000004059_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004059
- CGC Family ID: CGCFAM_06076
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004059_46 | MGYG000004059_46_3 | 1206 | 3455 | + | GT51 |
| NULL(UNKNOWN) | MGYG000004059_46 | MGYG000004059_46_4 | 3576 | 3857 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000004059_46 | MGYG000004059_46_5 | 3881 | 5407 | + | C40.UPW |
| TC | MGYG000004059_46 | MGYG000004059_46_6 | 5530 | 6849 | - | 2.A.56.1.8 |
Gene ID: MGYG000004059_46_3
Type: CAZyme
Location: 1206 - 3455 (+)
Type: CAZyme
Location: 1206 - 3455 (+)
Gene ID: MGYG000004059_46_4
Type:
Location: 3576 - 3857 (+)
Type:
Location: 3576 - 3857 (+)
Gene ID: MGYG000004059_46_5
Type: peptidase
Location: 3881 - 5407 (+)
Type: peptidase
Location: 3881 - 5407 (+)
Gene ID: MGYG000004059_46_6
Type: TC
Location: 5530 - 6849 (-)
Type: TC
Location: 5530 - 6849 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp003150355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004059_46_4 | vegetarian > omnivore | 2.76966 | 0.00029 |
| MGYG000004059_46_5 | vegetarian > omnivore | 2.16610 | 0.00029 |
| MGYG000004059_46_6 | vegetarian > vegan | 1.24700 | 0.01057 |