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Cluster: MGYG000004059_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004059_41 MGYG000004059_41_2 1003 1881 - 3.A.1.24.5
TC MGYG000004059_41 MGYG000004059_41_3 2034 2711 - 3.A.1.24.1
TC MGYG000004059_41 MGYG000004059_41_4 2711 3700 - 3.A.1.24.2
NULL(UNKNOWN) MGYG000004059_41 MGYG000004059_41_5 3780 3890 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000004059_41 MGYG000004059_41_6 4071 4232 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004059_41 MGYG000004059_41_7 4229 6238 - 9.A.8.1.6
TC MGYG000004059_41 MGYG000004059_41_8 6235 6468 - 9.A.8.1.6
peptidase MGYG000004059_41 MGYG000004059_41_9 6631 7500 - I87.UPW
peptidase MGYG000004059_41 MGYG000004059_41_10 7500 8480 - I87.UPW
TC MGYG000004059_41 MGYG000004059_41_11 8670 9623 + 3.A.1.132.1
TC MGYG000004059_41 MGYG000004059_41_12 9620 10483 + 3.A.1.132.1
TC MGYG000004059_41 MGYG000004059_41_13 10483 11940 + 3.A.1.132.9
pfam MGYG000004059_41 MGYG000004059_41_14 11937 13343 + DUF4340 | DUF4340
pfam MGYG000004059_41 MGYG000004059_41_15 13428 14303 - BcrAD_BadFG
CAZyme MGYG000004059_41 MGYG000004059_41_16 14318 15844 - GH3
Gene ID: MGYG000004059_41_2
Type: TC
Location: 1003 - 1881 (-)
Gene ID: MGYG000004059_41_3
Type: TC
Location: 2034 - 2711 (-)
Gene ID: MGYG000004059_41_4
Type: TC
Location: 2711 - 3700 (-)
Gene ID: MGYG000004059_41_5
Type:
Location: 3780 - 3890 (-)
Gene ID: MGYG000004059_41_6
Type:
Location: 4071 - 4232 (-)
Gene ID: MGYG000004059_41_7
Type: TC
Location: 4229 - 6238 (-)
Gene ID: MGYG000004059_41_8
Type: TC
Location: 6235 - 6468 (-)
Gene ID: MGYG000004059_41_9
Type: peptidase
Location: 6631 - 7500 (-)
Gene ID: MGYG000004059_41_10
Type: peptidase
Location: 7500 - 8480 (-)
Gene ID: MGYG000004059_41_11
Type: TC
Location: 8670 - 9623 (+)
Gene ID: MGYG000004059_41_12
Type: TC
Location: 9620 - 10483 (+)
Gene ID: MGYG000004059_41_13
Type: TC
Location: 10483 - 11940 (+)
Gene ID: MGYG000004059_41_14
Type: pfam
Location: 11937 - 13343 (+)
Gene ID: MGYG000004059_41_15
Type: pfam
Location: 13428 - 14303 (-)
Gene ID: MGYG000004059_41_16
Type: CAZyme
Location: 14318 - 15844 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004059_41_2 vegan > omnivore 1.04630 0.04963
MGYG000004059_41_2 vegetarian > omnivore 1.40102 0.00029
MGYG000004059_41_3 vegetarian > omnivore 1.46191 0.00029
MGYG000004059_41_5 vegetarian > omnivore 1.98707 0.00029
MGYG000004059_41_5 vegetarian > vegan 1.23652 0.01057
MGYG000004059_41_6 vegetarian > omnivore 3.43497 0.00029
MGYG000004059_41_12 vegetarian > omnivore 2.58549 0.00029
MGYG000004059_41_13 vegetarian > omnivore 2.62472 0.00029
MGYG000004059_41_14 vegetarian > omnivore 2.65314 0.00029
MGYG000004059_41_15 vegetarian > omnivore 1.70105 0.00029
MGYG000004059_41_16 vegetarian > omnivore 2.06300 0.00029
MGYG000004059_41_16 vegetarian > vegan 1.59926 0.01057

🧭 Explore Read Mapping of CGC

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