Cluster: MGYG000004059_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004059_37 | MGYG000004059_37_2 | 1059 | 2192 | - | GH18 |
| peptidase | MGYG000004059_37 | MGYG000004059_37_3 | 2325 | 4124 | + | M03.UPB |
| pfam | MGYG000004059_37 | MGYG000004059_37_4 | 4161 | 5075 | + | MotA_ExbB |
| TC | MGYG000004059_37 | MGYG000004059_37_5 | 5072 | 6058 | + | 1.B.6.1.2 |
| CAZyme | MGYG000004059_37 | MGYG000004059_37_6 | 6883 | 7776 | - | GH25 |
Gene ID: MGYG000004059_37_2
Type: CAZyme
Location: 1059 - 2192 (-)
Type: CAZyme
Location: 1059 - 2192 (-)
Gene ID: MGYG000004059_37_3
Type: peptidase
Location: 2325 - 4124 (+)
Type: peptidase
Location: 2325 - 4124 (+)
Gene ID: MGYG000004059_37_4
Type: pfam
Location: 4161 - 5075 (+)
Type: pfam
Location: 4161 - 5075 (+)
Gene ID: MGYG000004059_37_5
Type: TC
Location: 5072 - 6058 (+)
Type: TC
Location: 5072 - 6058 (+)
Gene ID: MGYG000004059_37_6
Type: CAZyme
Location: 6883 - 7776 (-)
Type: CAZyme
Location: 6883 - 7776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp003150355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004059_37_2 | vegetarian > omnivore | 1.21646 | 0.00029 |
| MGYG000004059_37_5 | vegetarian > omnivore | 3.01194 | 0.00029 |
| MGYG000004059_37_6 | vegetarian > omnivore | 1.36796 | 0.00029 |