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Cluster: MGYG000004054_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004054_4 MGYG000004054_4_41 42375 43775 + GH1
TC MGYG000004054_4 MGYG000004054_4_42 43896 45239 + 4.A.3.2.9
TC MGYG000004054_4 MGYG000004054_4_43 45401 45703 + 4.A.3.2.9
TC MGYG000004054_4 MGYG000004054_4_44 45713 46045 + 4.A.3.2.3
pfam MGYG000004054_4 MGYG000004054_4_45 46287 47240 + ROK
pfam MGYG000004054_4 MGYG000004054_4_46 47407 48330 + DHH | DHHA2
TC MGYG000004054_4 MGYG000004054_4_47 48598 49956 + 2.A.33.1.1
Gene ID: MGYG000004054_4_41
Type: CAZyme
Location: 42375 - 43775 (+)
Gene ID: MGYG000004054_4_42
Type: TC
Location: 43896 - 45239 (+)
Gene ID: MGYG000004054_4_43
Type: TC
Location: 45401 - 45703 (+)
Gene ID: MGYG000004054_4_44
Type: TC
Location: 45713 - 46045 (+)
Gene ID: MGYG000004054_4_45
Type: pfam
Location: 46287 - 47240 (+)
Gene ID: MGYG000004054_4_46
Type: pfam
Location: 47407 - 48330 (+)
Gene ID: MGYG000004054_4_47
Type: TC
Location: 48598 - 49956 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004054_4_43 vegan > omnivore 1.02161 0.00863

🧭 Explore Read Mapping of CGC

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