Cluster: MGYG000004033_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004033
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004033_47 | MGYG000004033_47_4 | 4346 | 5401 | + | GH179 |
| TC | MGYG000004033_47 | MGYG000004033_47_5 | 5803 | 7752 | - | 3.A.1.135.5 |
| TC | MGYG000004033_47 | MGYG000004033_47_6 | 7736 | 9481 | - | 3.A.1.135.5 |
| TF | MGYG000004033_47 | MGYG000004033_47_7 | 9587 | 10012 | - | MarR |
| TC | MGYG000004033_47 | MGYG000004033_47_8 | 11020 | 12714 | - | 8.A.7.1.1 |
| STP | MGYG000004033_47 | MGYG000004033_47_9 | 12714 | 12980 | - | PTS-HPr |
| TC | MGYG000004033_47 | MGYG000004033_47_10 | 13360 | 14523 | - | 4.A.2.1.20 |
Gene ID: MGYG000004033_47_4
Type: CAZyme
Location: 4346 - 5401 (+)
Type: CAZyme
Location: 4346 - 5401 (+)
Gene ID: MGYG000004033_47_5
Type: TC
Location: 5803 - 7752 (-)
Type: TC
Location: 5803 - 7752 (-)
Gene ID: MGYG000004033_47_6
Type: TC
Location: 7736 - 9481 (-)
Type: TC
Location: 7736 - 9481 (-)
Gene ID: MGYG000004033_47_7
Type: TF
Location: 9587 - 10012 (-)
Type: TF
Location: 9587 - 10012 (-)
Gene ID: MGYG000004033_47_8
Type: TC
Location: 11020 - 12714 (-)
Type: TC
Location: 11020 - 12714 (-)
Gene ID: MGYG000004033_47_9
Type: STP
Location: 12714 - 12980 (-)
Type: STP
Location: 12714 - 12980 (-)
Gene ID: MGYG000004033_47_10
Type: TC
Location: 13360 - 14523 (-)
Type: TC
Location: 13360 - 14523 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UBA644
Genus
Geddesella
Species
Geddesella stercoravicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.