Cluster: MGYG000004033_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004033
- CGC Family ID: CGCFAM_03524
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004033_30 | MGYG000004033_30_13 | 13872 | 15980 | + | GT2 | GT4 |
| pfam | MGYG000004033_30 | MGYG000004033_30_14 | 16001 | 17425 | + | Wzy_C |
| pfam | MGYG000004033_30 | MGYG000004033_30_15 | 17422 | 18411 | + | Stealth_CR2 | Stealth_CR1 | Stealth_CR3 |
| CAZyme | MGYG000004033_30 | MGYG000004033_30_16 | 18435 | 19505 | + | GT2 |
| CAZyme | MGYG000004033_30 | MGYG000004033_30_17 | 19525 | 20592 | + | GT113 |
| TC | MGYG000004033_30 | MGYG000004033_30_18 | 20606 | 22048 | + | 2.A.66.2.16 |
Gene ID: MGYG000004033_30_13
Type: CAZyme
Location: 13872 - 15980 (+)
Type: CAZyme
Location: 13872 - 15980 (+)
Gene ID: MGYG000004033_30_14
Type: pfam
Location: 16001 - 17425 (+)
Type: pfam
Location: 16001 - 17425 (+)
Gene ID: MGYG000004033_30_15
Type: pfam
Location: 17422 - 18411 (+)
Type: pfam
Location: 17422 - 18411 (+)
Gene ID: MGYG000004033_30_16
Type: CAZyme
Location: 18435 - 19505 (+)
Type: CAZyme
Location: 18435 - 19505 (+)
Gene ID: MGYG000004033_30_17
Type: CAZyme
Location: 19525 - 20592 (+)
Type: CAZyme
Location: 19525 - 20592 (+)
Gene ID: MGYG000004033_30_18
Type: TC
Location: 20606 - 22048 (+)
Type: TC
Location: 20606 - 22048 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UBA644
Genus
Geddesella
Species
Geddesella stercoravicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.