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Cluster: MGYG000004021_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004021_22 MGYG000004021_22_26 28252 29934 - 4.C.1.1.7
pfam MGYG000004021_22 MGYG000004021_22_27 30136 30780 - YkuD_2
CAZyme MGYG000004021_22 MGYG000004021_22_28 31177 32238 + GH43_1
pfam MGYG000004021_22 MGYG000004021_22_29 32395 33720 + UPF0004 | Radical_SAM
pfam MGYG000004021_22 MGYG000004021_22_30 33724 34620 + Lip_A_acyltrans
CAZyme MGYG000004021_22 MGYG000004021_22_31 34630 35628 + GT2
pfam MGYG000004021_22 MGYG000004021_22_32 35648 36304 - ACPS
NULL(UNKNOWN) MGYG000004021_22 MGYG000004021_22_33 36291 36890 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000004021_22 MGYG000004021_22_34 36880 38094 - 9.A.40.1.2
Gene ID: MGYG000004021_22_26
Type: TC
Location: 28252 - 29934 (-)
Gene ID: MGYG000004021_22_27
Type: pfam
Location: 30136 - 30780 (-)
Gene ID: MGYG000004021_22_28
Type: CAZyme
Location: 31177 - 32238 (+)
Gene ID: MGYG000004021_22_29
Type: pfam
Location: 32395 - 33720 (+)
Gene ID: MGYG000004021_22_30
Type: pfam
Location: 33724 - 34620 (+)
Gene ID: MGYG000004021_22_31
Type: CAZyme
Location: 34630 - 35628 (+)
Gene ID: MGYG000004021_22_32
Type: pfam
Location: 35648 - 36304 (-)
Gene ID: MGYG000004021_22_33
Type:
Location: 36291 - 36890 (-)
Gene ID: MGYG000004021_22_34
Type: TC
Location: 36880 - 38094 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004021_22_29 vegetarian > vegan 1.25453 0.00565
MGYG000004021_22_31 vegan > omnivore 1.38850 0.01819

🧭 Explore Read Mapping of CGC

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