Cluster: MGYG000004021_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004021
- CGC Family ID: CGCFAM_03991
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004021_21 | MGYG000004021_21_22 | 26773 | 28191 | + | 2.A.62.1.3 |
| TC | MGYG000004021_21 | MGYG000004021_21_23 | 28350 | 29768 | + | 2.A.62.1.3 |
| NULL(UNKNOWN) | MGYG000004021_21 | MGYG000004021_21_24 | 29910 | 30068 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004021_21 | MGYG000004021_21_25 | 30370 | 31623 | - | GH10 |
| CAZyme | MGYG000004021_21 | MGYG000004021_21_26 | 31645 | 34080 | - | CBM89 |
Gene ID: MGYG000004021_21_22
Type: TC
Location: 26773 - 28191 (+)
Type: TC
Location: 26773 - 28191 (+)
Gene ID: MGYG000004021_21_23
Type: TC
Location: 28350 - 29768 (+)
Type: TC
Location: 28350 - 29768 (+)
Gene ID: MGYG000004021_21_24
Type:
Location: 29910 - 30068 (+)
Type:
Location: 29910 - 30068 (+)
Gene ID: MGYG000004021_21_25
Type: CAZyme
Location: 30370 - 31623 (-)
Type: CAZyme
Location: 30370 - 31623 (-)
Gene ID: MGYG000004021_21_26
Type: CAZyme
Location: 31645 - 34080 (-)
Type: CAZyme
Location: 31645 - 34080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004021_21_23 | vegetarian > vegan | 1.25257 | 0.00565 |