Cluster: MGYG000004021_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004021
- CGC Family ID: CGCFAM_05980
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004021_15 | MGYG000004021_15_43 | 50078 | 50446 | + | 2.A.7.34.3 |
| CAZyme | MGYG000004021_15 | MGYG000004021_15_44 | 50536 | 52728 | + | CBM77 | PL1 |
| TF | MGYG000004021_15 | MGYG000004021_15_45 | 52960 | 57216 | + | HTH_AraC |
| CAZyme | MGYG000004021_15 | MGYG000004021_15_46 | 57400 | 59559 | + | PL1_2 |
| CAZyme | MGYG000004021_15 | MGYG000004021_15_47 | 59581 | 63348 | + | CE8 |
Gene ID: MGYG000004021_15_43
Type: TC
Location: 50078 - 50446 (+)
Type: TC
Location: 50078 - 50446 (+)
Gene ID: MGYG000004021_15_44
Type: CAZyme
Location: 50536 - 52728 (+)
Type: CAZyme
Location: 50536 - 52728 (+)
Gene ID: MGYG000004021_15_45
Type: TF
Location: 52960 - 57216 (+)
Type: TF
Location: 52960 - 57216 (+)
Gene ID: MGYG000004021_15_46
Type: CAZyme
Location: 57400 - 59559 (+)
Type: CAZyme
Location: 57400 - 59559 (+)
Gene ID: MGYG000004021_15_47
Type: CAZyme
Location: 59581 - 63348 (+)
Type: CAZyme
Location: 59581 - 63348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.