Cluster: MGYG000004021_CGC21
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004021
- CGC Family ID: CGCFAM_01986
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004021_15 | MGYG000004021_15_10 | 7897 | 9066 | - | GH171 |
| NULL(UNKNOWN) | MGYG000004021_15 | MGYG000004021_15_11 | 9338 | 9826 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004021_15 | MGYG000004021_15_12 | 9863 | 10387 | + | HSP20 | ArsA_HSP20 |
| CAZyme | MGYG000004021_15 | MGYG000004021_15_13 | 10440 | 11633 | - | GT2 |
| pfam | MGYG000004021_15 | MGYG000004021_15_14 | 11888 | 12691 | + | Poly_export | SLBB_2 |
| TC | MGYG000004021_15 | MGYG000004021_15_15 | 12722 | 15040 | + | 8.A.3.3.4 |
| NULL(UNKNOWN) | MGYG000004021_15 | MGYG000004021_15_16 | 15204 | 16649 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000004021_15 | MGYG000004021_15_17 | 16646 | 17686 | + | GT4 |
| CAZyme | MGYG000004021_15 | MGYG000004021_15_18 | 17753 | 18766 | + | GT4 |
| CAZyme | MGYG000004021_15 | MGYG000004021_15_19 | 18972 | 19652 | + | GT26 |
| pfam | MGYG000004021_15 | MGYG000004021_15_20 | 19820 | 20248 | + | Lipocalin_8 |
| TC | MGYG000004021_15 | MGYG000004021_15_21 | 20254 | 21717 | + | 1.B.73.2.2 |
Gene ID: MGYG000004021_15_10
Type: CAZyme
Location: 7897 - 9066 (-)
Type: CAZyme
Location: 7897 - 9066 (-)
Gene ID: MGYG000004021_15_11
Type:
Location: 9338 - 9826 (+)
Type:
Location: 9338 - 9826 (+)
Gene ID: MGYG000004021_15_12
Type: pfam
Location: 9863 - 10387 (+)
Type: pfam
Location: 9863 - 10387 (+)
Gene ID: MGYG000004021_15_13
Type: CAZyme
Location: 10440 - 11633 (-)
Type: CAZyme
Location: 10440 - 11633 (-)
Gene ID: MGYG000004021_15_14
Type: pfam
Location: 11888 - 12691 (+)
Type: pfam
Location: 11888 - 12691 (+)
Gene ID: MGYG000004021_15_15
Type: TC
Location: 12722 - 15040 (+)
Type: TC
Location: 12722 - 15040 (+)
Gene ID: MGYG000004021_15_16
Type:
Location: 15204 - 16649 (+)
Type:
Location: 15204 - 16649 (+)
Gene ID: MGYG000004021_15_17
Type: CAZyme
Location: 16646 - 17686 (+)
Type: CAZyme
Location: 16646 - 17686 (+)
Gene ID: MGYG000004021_15_18
Type: CAZyme
Location: 17753 - 18766 (+)
Type: CAZyme
Location: 17753 - 18766 (+)
Gene ID: MGYG000004021_15_19
Type: CAZyme
Location: 18972 - 19652 (+)
Type: CAZyme
Location: 18972 - 19652 (+)
Gene ID: MGYG000004021_15_20
Type: pfam
Location: 19820 - 20248 (+)
Type: pfam
Location: 19820 - 20248 (+)
Gene ID: MGYG000004021_15_21
Type: TC
Location: 20254 - 21717 (+)
Type: TC
Location: 20254 - 21717 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.