Cluster: MGYG000004021_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004021
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004021_13 | MGYG000004021_13_29 | 30314 | 31267 | + | GT2 |
| CAZyme | MGYG000004021_13 | MGYG000004021_13_30 | 31361 | 32389 | + | GT2 |
| NULL(UNKNOWN) | MGYG000004021_13 | MGYG000004021_13_31 | 32557 | 33387 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000004021_13 | MGYG000004021_13_32 | 33469 | 34533 | - | M20.UPA |
| TC | MGYG000004021_13 | MGYG000004021_13_33 | 34930 | 36729 | + | 4.C.1.1.14 |
Gene ID: MGYG000004021_13_29
Type: CAZyme
Location: 30314 - 31267 (+)
Type: CAZyme
Location: 30314 - 31267 (+)
Gene ID: MGYG000004021_13_30
Type: CAZyme
Location: 31361 - 32389 (+)
Type: CAZyme
Location: 31361 - 32389 (+)
Gene ID: MGYG000004021_13_31
Type:
Location: 32557 - 33387 (+)
Type:
Location: 32557 - 33387 (+)
Gene ID: MGYG000004021_13_32
Type: peptidase
Location: 33469 - 34533 (-)
Type: peptidase
Location: 33469 - 34533 (-)
Gene ID: MGYG000004021_13_33
Type: TC
Location: 34930 - 36729 (+)
Type: TC
Location: 34930 - 36729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004021_13_30 | vegetarian > omnivore | 1.24197 | 0.04819 |
| MGYG000004021_13_30 | vegetarian > vegan | 5.28622 | 0.00565 |
| MGYG000004021_13_32 | vegetarian > omnivore | 1.68529 | 0.04819 |
| MGYG000004021_13_32 | vegetarian > vegan | 5.48765 | 0.00565 |