Cluster: MGYG000004021_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004021
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004021_8 | MGYG000004021_8_18 | 22394 | 24313 | + | GH133 |
| CAZyme | MGYG000004021_8 | MGYG000004021_8_19 | 24342 | 25604 | + | GT4 |
| CAZyme | MGYG000004021_8 | MGYG000004021_8_20 | 25642 | 27006 | + | GH57 |
| pfam | MGYG000004021_8 | MGYG000004021_8_21 | 27126 | 28232 | - | AA_kinase | PUA |
| TC | MGYG000004021_8 | MGYG000004021_8_22 | 28245 | 29900 | - | 2.A.1.42.2 |
Gene ID: MGYG000004021_8_18
Type: CAZyme
Location: 22394 - 24313 (+)
Type: CAZyme
Location: 22394 - 24313 (+)
Gene ID: MGYG000004021_8_19
Type: CAZyme
Location: 24342 - 25604 (+)
Type: CAZyme
Location: 24342 - 25604 (+)
Gene ID: MGYG000004021_8_20
Type: CAZyme
Location: 25642 - 27006 (+)
Type: CAZyme
Location: 25642 - 27006 (+)
Gene ID: MGYG000004021_8_21
Type: pfam
Location: 27126 - 28232 (-)
Type: pfam
Location: 27126 - 28232 (-)
Gene ID: MGYG000004021_8_22
Type: TC
Location: 28245 - 29900 (-)
Type: TC
Location: 28245 - 29900 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004021_8_20 | vegetarian > omnivore | 1.14453 | 0.04819 |
| MGYG000004021_8_20 | vegetarian > vegan | 1.83796 | 0.00565 |