Cluster: MGYG000004021_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000004021
- CGC Family ID: CGCFAM_05985
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004021_4 | MGYG000004021_4_126 | 155685 | 157082 | - | GH28 |
| CAZyme | MGYG000004021_4 | MGYG000004021_4_127 | 157689 | 159257 | + | GH28 |
| sulfatase | MGYG000004021_4 | MGYG000004021_4_128 | 159392 | 160243 | - | S1_6 |
| CAZyme | MGYG000004021_4 | MGYG000004021_4_129 | 160499 | 161653 | + | GH105 |
| TC | MGYG000004021_4 | MGYG000004021_4_130 | 161746 | 162417 | - | 2.A.115.2.8 |
| TC | MGYG000004021_4 | MGYG000004021_4_131 | 162780 | 164072 | + | 9.A.40.2.4 |
| CAZyme | MGYG000004021_4 | MGYG000004021_4_132 | 164172 | 166073 | - | PL10_1 |
| peptidase | MGYG000004021_4 | MGYG000004021_4_133 | 166351 | 167256 | - | M24.001 |
| CAZyme | MGYG000004021_4 | MGYG000004021_4_134 | 167550 | 168455 | + | GH43_18 |
| CAZyme | MGYG000004021_4 | MGYG000004021_4_135 | 168468 | 169871 | + | CE19 |
| CAZyme | MGYG000004021_4 | MGYG000004021_4_136 | 169950 | 170888 | - | GT2 |
Gene ID: MGYG000004021_4_126
Type: CAZyme
Location: 155685 - 157082 (-)
Type: CAZyme
Location: 155685 - 157082 (-)
Gene ID: MGYG000004021_4_127
Type: CAZyme
Location: 157689 - 159257 (+)
Type: CAZyme
Location: 157689 - 159257 (+)
Gene ID: MGYG000004021_4_128
Type: sulfatase
Location: 159392 - 160243 (-)
Type: sulfatase
Location: 159392 - 160243 (-)
Gene ID: MGYG000004021_4_129
Type: CAZyme
Location: 160499 - 161653 (+)
Type: CAZyme
Location: 160499 - 161653 (+)
Gene ID: MGYG000004021_4_130
Type: TC
Location: 161746 - 162417 (-)
Type: TC
Location: 161746 - 162417 (-)
Gene ID: MGYG000004021_4_131
Type: TC
Location: 162780 - 164072 (+)
Type: TC
Location: 162780 - 164072 (+)
Gene ID: MGYG000004021_4_132
Type: CAZyme
Location: 164172 - 166073 (-)
Type: CAZyme
Location: 164172 - 166073 (-)
Gene ID: MGYG000004021_4_133
Type: peptidase
Location: 166351 - 167256 (-)
Type: peptidase
Location: 166351 - 167256 (-)
Gene ID: MGYG000004021_4_134
Type: CAZyme
Location: 167550 - 168455 (+)
Type: CAZyme
Location: 167550 - 168455 (+)
Gene ID: MGYG000004021_4_135
Type: CAZyme
Location: 168468 - 169871 (+)
Type: CAZyme
Location: 168468 - 169871 (+)
Gene ID: MGYG000004021_4_136
Type: CAZyme
Location: 169950 - 170888 (-)
Type: CAZyme
Location: 169950 - 170888 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.