Cluster: MGYG000004021_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004021
- CGC Family ID: CGCFAM_09609
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004021_4 | MGYG000004021_4_40 | 43249 | 44646 | - | PL1_2 |
| pfam | MGYG000004021_4 | MGYG000004021_4_41 | 44747 | 45547 | - | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 |
| CAZyme | MGYG000004021_4 | MGYG000004021_4_42 | 45555 | 47129 | - | GH28 |
| pfam | MGYG000004021_4 | MGYG000004021_4_43 | 47375 | 48883 | - | CotH |
| TC | MGYG000004021_4 | MGYG000004021_4_44 | 49091 | 51481 | + | 9.A.8.1.6 |
| TC | MGYG000004021_4 | MGYG000004021_4_45 | 52046 | 53224 | - | 2.A.1.2.97 |
Gene ID: MGYG000004021_4_40
Type: CAZyme
Location: 43249 - 44646 (-)
Type: CAZyme
Location: 43249 - 44646 (-)
Gene ID: MGYG000004021_4_41
Type: pfam
Location: 44747 - 45547 (-)
Type: pfam
Location: 44747 - 45547 (-)
Gene ID: MGYG000004021_4_42
Type: CAZyme
Location: 45555 - 47129 (-)
Type: CAZyme
Location: 45555 - 47129 (-)
Gene ID: MGYG000004021_4_43
Type: pfam
Location: 47375 - 48883 (-)
Type: pfam
Location: 47375 - 48883 (-)
Gene ID: MGYG000004021_4_44
Type: TC
Location: 49091 - 51481 (+)
Type: TC
Location: 49091 - 51481 (+)
Gene ID: MGYG000004021_4_45
Type: TC
Location: 52046 - 53224 (-)
Type: TC
Location: 52046 - 53224 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.