Cluster: MGYG000004018_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004018
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004018_4 | MGYG000004018_4_126 | 147915 | 148691 | + | 9.B.18.1.2 |
| CAZyme | MGYG000004018_4 | MGYG000004018_4_127 | 148692 | 149801 | + | GT4 |
| pfam | MGYG000004018_4 | MGYG000004018_4_128 | 149801 | 150919 | + | PS_pyruv_trans |
| STP | MGYG000004018_4 | MGYG000004018_4_129 | 150933 | 152138 | + | Fer4 | Fer4 |
| CAZyme | MGYG000004018_4 | MGYG000004018_4_130 | 152131 | 153348 | + | GT4 |
| CAZyme | MGYG000004018_4 | MGYG000004018_4_131 | 153366 | 154310 | + | GT2 |
Gene ID: MGYG000004018_4_126
Type: TC
Location: 147915 - 148691 (+)
Type: TC
Location: 147915 - 148691 (+)
Gene ID: MGYG000004018_4_127
Type: CAZyme
Location: 148692 - 149801 (+)
Type: CAZyme
Location: 148692 - 149801 (+)
Gene ID: MGYG000004018_4_128
Type: pfam
Location: 149801 - 150919 (+)
Type: pfam
Location: 149801 - 150919 (+)
Gene ID: MGYG000004018_4_129
Type: STP
Location: 150933 - 152138 (+)
Type: STP
Location: 150933 - 152138 (+)
Gene ID: MGYG000004018_4_130
Type: CAZyme
Location: 152131 - 153348 (+)
Type: CAZyme
Location: 152131 - 153348 (+)
Gene ID: MGYG000004018_4_131
Type: CAZyme
Location: 153366 - 154310 (+)
Type: CAZyme
Location: 153366 - 154310 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.