Cluster: MGYG000004018_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004018
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004018_4 | MGYG000004018_4_27 | 33904 | 34923 | + | 9.B.146.1.6 |
| pfam | MGYG000004018_4 | MGYG000004018_4_28 | 34933 | 36339 | + | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000004018_4 | MGYG000004018_4_29 | 36349 | 37869 | + | 2.A.103.1.1 |
| CAZyme | MGYG000004018_4 | MGYG000004018_4_30 | 37859 | 38974 | + | GT28 |
Gene ID: MGYG000004018_4_27
Type: TC
Location: 33904 - 34923 (+)
Type: TC
Location: 33904 - 34923 (+)
Gene ID: MGYG000004018_4_28
Type: pfam
Location: 34933 - 36339 (+)
Type: pfam
Location: 34933 - 36339 (+)
Gene ID: MGYG000004018_4_29
Type: TC
Location: 36349 - 37869 (+)
Type: TC
Location: 36349 - 37869 (+)
Gene ID: MGYG000004018_4_30
Type: CAZyme
Location: 37859 - 38974 (+)
Type: CAZyme
Location: 37859 - 38974 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.