Cluster: MGYG000004018_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004018
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004018_2 | MGYG000004018_2_158 | 194202 | 194675 | + | 4.A.6.1.18 |
| TC | MGYG000004018_2 | MGYG000004018_2_159 | 194685 | 195470 | + | 4.A.6.1.13 |
| TC | MGYG000004018_2 | MGYG000004018_2_160 | 195473 | 196306 | + | 4.A.6.1.13 |
| TC | MGYG000004018_2 | MGYG000004018_2_161 | 196333 | 196731 | + | 4.A.6.1.9 |
| CAZyme | MGYG000004018_2 | MGYG000004018_2_162 | 196744 | 197868 | + | GH172 |
Gene ID: MGYG000004018_2_158
Type: TC
Location: 194202 - 194675 (+)
Type: TC
Location: 194202 - 194675 (+)
Gene ID: MGYG000004018_2_159
Type: TC
Location: 194685 - 195470 (+)
Type: TC
Location: 194685 - 195470 (+)
Gene ID: MGYG000004018_2_160
Type: TC
Location: 195473 - 196306 (+)
Type: TC
Location: 195473 - 196306 (+)
Gene ID: MGYG000004018_2_161
Type: TC
Location: 196333 - 196731 (+)
Type: TC
Location: 196333 - 196731 (+)
Gene ID: MGYG000004018_2_162
Type: CAZyme
Location: 196744 - 197868 (+)
Type: CAZyme
Location: 196744 - 197868 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000004018_2_158 | vegan > omnivore | 1.01147 | 0.01057 |