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Cluster: MGYG000004018_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000004018_1 MGYG000004018_1_22 22775 23569 - 3.A.1.34.1
TC MGYG000004018_1 MGYG000004018_1_23 23562 24485 - 3.A.1.34.1
TC MGYG000004018_1 MGYG000004018_1_24 24690 25670 - 3.A.1.34.1
NULL(UNKNOWN) MGYG000004018_1 MGYG000004018_1_25 25831 26616 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000004018_1 MGYG000004018_1_26 26875 28278 - tRNA-synt_2 | tRNA_anti-codon
TC MGYG000004018_1 MGYG000004018_1_27 28460 29023 - 4.A.1.2.6
peptidase MGYG000004018_1 MGYG000004018_1_28 29187 30170 + S09.UPW
TC MGYG000004018_1 MGYG000004018_1_29 30355 32715 + 9.A.8.1.6
TC MGYG000004018_1 MGYG000004018_1_30 32837 34033 + 2.A.1.2.18
CAZyme MGYG000004018_1 MGYG000004018_1_31 34187 35563 + GH13_20
Gene ID: MGYG000004018_1_22
Type: TC
Location: 22775 - 23569 (-)
Gene ID: MGYG000004018_1_23
Type: TC
Location: 23562 - 24485 (-)
Gene ID: MGYG000004018_1_24
Type: TC
Location: 24690 - 25670 (-)
Gene ID: MGYG000004018_1_25
Type:
Location: 25831 - 26616 (-)
Gene ID: MGYG000004018_1_26
Type: pfam
Location: 26875 - 28278 (-)
Gene ID: MGYG000004018_1_27
Type: TC
Location: 28460 - 29023 (-)
Gene ID: MGYG000004018_1_28
Type: peptidase
Location: 29187 - 30170 (+)
Gene ID: MGYG000004018_1_29
Type: TC
Location: 30355 - 32715 (+)
Gene ID: MGYG000004018_1_30
Type: TC
Location: 32837 - 34033 (+)
Gene ID: MGYG000004018_1_31
Type: CAZyme
Location: 34187 - 35563 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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