Cluster: MGYG000004018_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004018
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004018_25 | MGYG000004018_25_22 | 16427 | 17194 | - | 3.A.1.103.1 |
| TC | MGYG000004018_25 | MGYG000004018_25_23 | 17206 | 18051 | - | 3.A.1.103.6 |
| CAZyme | MGYG000004018_25 | MGYG000004018_25_24 | 18212 | 19183 | + | GT81 |
Gene ID: MGYG000004018_25_22
Type: TC
Location: 16427 - 17194 (-)
Type: TC
Location: 16427 - 17194 (-)
Gene ID: MGYG000004018_25_23
Type: TC
Location: 17206 - 18051 (-)
Type: TC
Location: 17206 - 18051 (-)
Gene ID: MGYG000004018_25_24
Type: CAZyme
Location: 18212 - 19183 (+)
Type: CAZyme
Location: 18212 - 19183 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.