Cluster: MGYG000004018_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004018
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004018_14 | MGYG000004018_14_10 | 13632 | 15314 | + | 2.A.66.4.4 |
| pfam | MGYG000004018_14 | MGYG000004018_14_11 | 15321 | 17261 | + | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | MGYG000004018_14 | MGYG000004018_14_12 | 17626 | 19239 | + | 3.A.1.5.27 |
| TC | MGYG000004018_14 | MGYG000004018_14_13 | 19397 | 20353 | + | 3.A.1.5.38 |
| TC | MGYG000004018_14 | MGYG000004018_14_14 | 20357 | 22372 | + | 3.A.1.5.25 |
| TC | MGYG000004018_14 | MGYG000004018_14_15 | 22373 | 23200 | + | 3.A.1.5.27 |
| CAZyme | MGYG000004018_14 | MGYG000004018_14_16 | 23332 | 24258 | + | CE7 |
Gene ID: MGYG000004018_14_10
Type: TC
Location: 13632 - 15314 (+)
Type: TC
Location: 13632 - 15314 (+)
Gene ID: MGYG000004018_14_11
Type: pfam
Location: 15321 - 17261 (+)
Type: pfam
Location: 15321 - 17261 (+)
Gene ID: MGYG000004018_14_12
Type: TC
Location: 17626 - 19239 (+)
Type: TC
Location: 17626 - 19239 (+)
Gene ID: MGYG000004018_14_13
Type: TC
Location: 19397 - 20353 (+)
Type: TC
Location: 19397 - 20353 (+)
Gene ID: MGYG000004018_14_14
Type: TC
Location: 20357 - 22372 (+)
Type: TC
Location: 20357 - 22372 (+)
Gene ID: MGYG000004018_14_15
Type: TC
Location: 22373 - 23200 (+)
Type: TC
Location: 22373 - 23200 (+)
Gene ID: MGYG000004018_14_16
Type: CAZyme
Location: 23332 - 24258 (+)
Type: CAZyme
Location: 23332 - 24258 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.