Cluster: MGYG000004018_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004018
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004018_10 | MGYG000004018_10_23 | 20875 | 21894 | + | GH109 |
| pfam | MGYG000004018_10 | MGYG000004018_10_24 | 22047 | 22913 | + | AP_endonuc_2 |
| TC | MGYG000004018_10 | MGYG000004018_10_25 | 23061 | 23921 | + | 3.A.1.3.15 |
| TC | MGYG000004018_10 | MGYG000004018_10_26 | 24040 | 25401 | + | 3.A.1.3.16 |
| TC | MGYG000004018_10 | MGYG000004018_10_27 | 25414 | 26166 | + | 3.A.1.3.20 |
Gene ID: MGYG000004018_10_23
Type: CAZyme
Location: 20875 - 21894 (+)
Type: CAZyme
Location: 20875 - 21894 (+)
Gene ID: MGYG000004018_10_24
Type: pfam
Location: 22047 - 22913 (+)
Type: pfam
Location: 22047 - 22913 (+)
Gene ID: MGYG000004018_10_25
Type: TC
Location: 23061 - 23921 (+)
Type: TC
Location: 23061 - 23921 (+)
Gene ID: MGYG000004018_10_26
Type: TC
Location: 24040 - 25401 (+)
Type: TC
Location: 24040 - 25401 (+)
Gene ID: MGYG000004018_10_27
Type: TC
Location: 25414 - 26166 (+)
Type: TC
Location: 25414 - 26166 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AD
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.