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Cluster: MGYG000004018_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000004018_8 MGYG000004018_8_11 10839 12008 - CE9
STP MGYG000004018_8 MGYG000004018_8_12 12126 13292 - SIS | SIS
TF MGYG000004018_8 MGYG000004018_8_13 13407 14138 - GntR
TC MGYG000004018_8 MGYG000004018_8_14 14324 15406 - 4.A.6.1.4
TC MGYG000004018_8 MGYG000004018_8_15 15396 16196 - 4.A.6.1.4
TC MGYG000004018_8 MGYG000004018_8_16 16287 16769 - 4.A.6.1.4
pfam MGYG000004018_8 MGYG000004018_8_17 16806 17087 - YajC
TC MGYG000004018_8 MGYG000004018_8_18 17087 17530 - 4.A.6.1.16
Gene ID: MGYG000004018_8_11
Type: CAZyme
Location: 10839 - 12008 (-)
Gene ID: MGYG000004018_8_12
Type: STP
Location: 12126 - 13292 (-)
Gene ID: MGYG000004018_8_13
Type: TF
Location: 13407 - 14138 (-)
Gene ID: MGYG000004018_8_14
Type: TC
Location: 14324 - 15406 (-)
Gene ID: MGYG000004018_8_15
Type: TC
Location: 15396 - 16196 (-)
Gene ID: MGYG000004018_8_16
Type: TC
Location: 16287 - 16769 (-)
Gene ID: MGYG000004018_8_17
Type: pfam
Location: 16806 - 17087 (-)
Gene ID: MGYG000004018_8_18
Type: TC
Location: 17087 - 17530 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000004018_8_17 vegan > omnivore 1.04369 0.01057

🧭 Explore Read Mapping of CGC

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