Cluster: MGYG000004015_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004015
- CGC Family ID: CGCFAM_10991
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004015_11 | MGYG000004015_11_39 | 40090 | 41427 | - | 2.A.26.1.9 |
| TC | MGYG000004015_11 | MGYG000004015_11_40 | 41645 | 42022 | - | 2.A.63.1.4 |
| TC | MGYG000004015_11 | MGYG000004015_11_41 | 42000 | 42284 | - | 2.A.63.1.4 |
| TC | MGYG000004015_11 | MGYG000004015_11_42 | 42285 | 42767 | - | 2.A.63.1.4 |
| TC | MGYG000004015_11 | MGYG000004015_11_43 | 42786 | 44273 | - | 2.A.63.1.4 |
| TC | MGYG000004015_11 | MGYG000004015_11_44 | 44263 | 44601 | - | 2.A.63.1.4 |
| TC | MGYG000004015_11 | MGYG000004015_11_45 | 44601 | 45026 | - | 2.A.63.1.2 |
| TC | MGYG000004015_11 | MGYG000004015_11_46 | 45013 | 47424 | - | 2.A.63.1.4 |
| NULL(UNKNOWN) | MGYG000004015_11 | MGYG000004015_11_47 | 47997 | 48587 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000004015_11 | MGYG000004015_11_48 | 48695 | 49894 | - | 2.A.1.35.1 |
| pfam | MGYG000004015_11 | MGYG000004015_11_49 | 50005 | 50739 | + | DUF421 | DUF421 | YetF_N |
| CAZyme | MGYG000004015_11 | MGYG000004015_11_50 | 50877 | 52541 | - | GH3 |
Gene ID: MGYG000004015_11_39
Type: TC
Location: 40090 - 41427 (-)
Type: TC
Location: 40090 - 41427 (-)
Gene ID: MGYG000004015_11_40
Type: TC
Location: 41645 - 42022 (-)
Type: TC
Location: 41645 - 42022 (-)
Gene ID: MGYG000004015_11_41
Type: TC
Location: 42000 - 42284 (-)
Type: TC
Location: 42000 - 42284 (-)
Gene ID: MGYG000004015_11_42
Type: TC
Location: 42285 - 42767 (-)
Type: TC
Location: 42285 - 42767 (-)
Gene ID: MGYG000004015_11_43
Type: TC
Location: 42786 - 44273 (-)
Type: TC
Location: 42786 - 44273 (-)
Gene ID: MGYG000004015_11_44
Type: TC
Location: 44263 - 44601 (-)
Type: TC
Location: 44263 - 44601 (-)
Gene ID: MGYG000004015_11_45
Type: TC
Location: 44601 - 45026 (-)
Type: TC
Location: 44601 - 45026 (-)
Gene ID: MGYG000004015_11_46
Type: TC
Location: 45013 - 47424 (-)
Type: TC
Location: 45013 - 47424 (-)
Gene ID: MGYG000004015_11_47
Type:
Location: 47997 - 48587 (+)
Type:
Location: 47997 - 48587 (+)
Gene ID: MGYG000004015_11_48
Type: TC
Location: 48695 - 49894 (-)
Type: TC
Location: 48695 - 49894 (-)
Gene ID: MGYG000004015_11_49
Type: pfam
Location: 50005 - 50739 (+)
Type: pfam
Location: 50005 - 50739 (+)
Gene ID: MGYG000004015_11_50
Type: CAZyme
Location: 50877 - 52541 (-)
Type: CAZyme
Location: 50877 - 52541 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales_A
Family
Planococcaceae
Genus
Psychrobacillus
Species
Psychrobacillus sp012843435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.