Cluster: MGYG000003993_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003993_3 | MGYG000003993_3_65 | 81927 | 83315 | - | CE11 |
| pfam | MGYG000003993_3 | MGYG000003993_3_66 | 83401 | 84213 | + | TonB_2 |
| TC | MGYG000003993_3 | MGYG000003993_3_67 | 84319 | 85818 | + | 2.A.36.6.5 |
| TF | MGYG000003993_3 | MGYG000003993_3_68 | 85913 | 86683 | - | LytTR |
| TC | MGYG000003993_3 | MGYG000003993_3_69 | 86680 | 87759 | - | 8.A.59.2.1 |
| pfam | MGYG000003993_3 | MGYG000003993_3_70 | 87917 | 88984 | - | Lipase_GDSL_2 | Lipase_GDSL_3 | GxDLY |
| TC | MGYG000003993_3 | MGYG000003993_3_71 | 89056 | 90711 | - | 4.C.1.1.7 |
| TC | MGYG000003993_3 | MGYG000003993_3_72 | 90808 | 91485 | - | 9.B.31.1.2 |
| TC | MGYG000003993_3 | MGYG000003993_3_73 | 91763 | 92713 | + | 2.A.115.1.1 |
| pfam | MGYG000003993_3 | MGYG000003993_3_74 | 92809 | 94086 | + | UPF0004 | TRAM | Radical_SAM |
| TC | MGYG000003993_3 | MGYG000003993_3_75 | 94384 | 95961 | + | 1.I.1.1.3 |
Gene ID: MGYG000003993_3_65
Type: CAZyme
Location: 81927 - 83315 (-)
Type: CAZyme
Location: 81927 - 83315 (-)
Gene ID: MGYG000003993_3_66
Type: pfam
Location: 83401 - 84213 (+)
Type: pfam
Location: 83401 - 84213 (+)
Gene ID: MGYG000003993_3_67
Type: TC
Location: 84319 - 85818 (+)
Type: TC
Location: 84319 - 85818 (+)
Gene ID: MGYG000003993_3_68
Type: TF
Location: 85913 - 86683 (-)
Type: TF
Location: 85913 - 86683 (-)
Gene ID: MGYG000003993_3_69
Type: TC
Location: 86680 - 87759 (-)
Type: TC
Location: 86680 - 87759 (-)
Gene ID: MGYG000003993_3_70
Type: pfam
Location: 87917 - 88984 (-)
Type: pfam
Location: 87917 - 88984 (-)
Gene ID: MGYG000003993_3_71
Type: TC
Location: 89056 - 90711 (-)
Type: TC
Location: 89056 - 90711 (-)
Gene ID: MGYG000003993_3_72
Type: TC
Location: 90808 - 91485 (-)
Type: TC
Location: 90808 - 91485 (-)
Gene ID: MGYG000003993_3_73
Type: TC
Location: 91763 - 92713 (+)
Type: TC
Location: 91763 - 92713 (+)
Gene ID: MGYG000003993_3_74
Type: pfam
Location: 92809 - 94086 (+)
Type: pfam
Location: 92809 - 94086 (+)
Gene ID: MGYG000003993_3_75
Type: TC
Location: 94384 - 95961 (+)
Type: TC
Location: 94384 - 95961 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900550925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.