Cluster: MGYG000003993_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003993_6 | MGYG000003993_6_89 | 102975 | 103982 | - | GH73 |
| pfam | MGYG000003993_6 | MGYG000003993_6_90 | 104165 | 104764 | + | DUF4254 |
| CAZyme | MGYG000003993_6 | MGYG000003993_6_91 | 104796 | 105776 | + | GT9 |
| pfam | MGYG000003993_6 | MGYG000003993_6_92 | 105905 | 107251 | + | OEP | OEP |
| TC | MGYG000003993_6 | MGYG000003993_6_93 | 107277 | 108461 | + | 2.A.6.2.39 |
| TC | MGYG000003993_6 | MGYG000003993_6_94 | 108466 | 109209 | + | 3.A.1.122.2 |
| TC | MGYG000003993_6 | MGYG000003993_6_95 | 109229 | 110449 | + | 3.A.1.122.12 |
| STP | MGYG000003993_6 | MGYG000003993_6_96 | 111060 | 112046 | + | HATPase_c |
| TF | MGYG000003993_6 | MGYG000003993_6_97 | 112027 | 112692 | + | GerE |
| TC | MGYG000003993_6 | MGYG000003993_6_98 | 112832 | 114079 | - | 3.A.23.1.1 |
Gene ID: MGYG000003993_6_89
Type: CAZyme
Location: 102975 - 103982 (-)
Type: CAZyme
Location: 102975 - 103982 (-)
Gene ID: MGYG000003993_6_90
Type: pfam
Location: 104165 - 104764 (+)
Type: pfam
Location: 104165 - 104764 (+)
Gene ID: MGYG000003993_6_91
Type: CAZyme
Location: 104796 - 105776 (+)
Type: CAZyme
Location: 104796 - 105776 (+)
Gene ID: MGYG000003993_6_92
Type: pfam
Location: 105905 - 107251 (+)
Type: pfam
Location: 105905 - 107251 (+)
Gene ID: MGYG000003993_6_93
Type: TC
Location: 107277 - 108461 (+)
Type: TC
Location: 107277 - 108461 (+)
Gene ID: MGYG000003993_6_94
Type: TC
Location: 108466 - 109209 (+)
Type: TC
Location: 108466 - 109209 (+)
Gene ID: MGYG000003993_6_95
Type: TC
Location: 109229 - 110449 (+)
Type: TC
Location: 109229 - 110449 (+)
Gene ID: MGYG000003993_6_96
Type: STP
Location: 111060 - 112046 (+)
Type: STP
Location: 111060 - 112046 (+)
Gene ID: MGYG000003993_6_97
Type: TF
Location: 112027 - 112692 (+)
Type: TF
Location: 112027 - 112692 (+)
Gene ID: MGYG000003993_6_98
Type: TC
Location: 112832 - 114079 (-)
Type: TC
Location: 112832 - 114079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900550925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.