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Cluster: MGYG000003987_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003987_5 MGYG000003987_5_20 22378 23283 + 3.A.1.140.1
pfam MGYG000003987_5 MGYG000003987_5_21 23280 24191 + FtsX | FtsX_ECD
STP MGYG000003987_5 MGYG000003987_5_22 24184 25512 + Peptidase_M23
TC MGYG000003987_5 MGYG000003987_5_23 25530 26732 + 9.B.174.1.2
CAZyme MGYG000003987_5 MGYG000003987_5_24 27135 27866 + GT2
CAZyme MGYG000003987_5 MGYG000003987_5_25 27949 28770 + GT2
pfam MGYG000003987_5 MGYG000003987_5_26 28767 29630 + ABC2_membrane
TC MGYG000003987_5 MGYG000003987_5_27 29643 30386 + 3.A.1.103.5
pfam MGYG000003987_5 MGYG000003987_5_28 30471 31187 + NTP_transferase | IspD | CTP_transf_3 | NTP_transf_3
pfam MGYG000003987_5 MGYG000003987_5_29 31180 32205 + ADH_zinc_N | ADH_N
CAZyme MGYG000003987_5 MGYG000003987_5_30 32331 33683 + GT2
pfam MGYG000003987_5 MGYG000003987_5_31 33737 34891 + Glyphos_transf
STP MGYG000003987_5 MGYG000003987_5_32 34991 36310 + Glycos_trans_3N
CAZyme MGYG000003987_5 MGYG000003987_5_33 36391 38844 + GH95
Gene ID: MGYG000003987_5_20
Type: TC
Location: 22378 - 23283 (+)
Gene ID: MGYG000003987_5_21
Type: pfam
Location: 23280 - 24191 (+)
Gene ID: MGYG000003987_5_22
Type: STP
Location: 24184 - 25512 (+)
Gene ID: MGYG000003987_5_23
Type: TC
Location: 25530 - 26732 (+)
Gene ID: MGYG000003987_5_24
Type: CAZyme
Location: 27135 - 27866 (+)
Gene ID: MGYG000003987_5_25
Type: CAZyme
Location: 27949 - 28770 (+)
Gene ID: MGYG000003987_5_26
Type: pfam
Location: 28767 - 29630 (+)
Gene ID: MGYG000003987_5_27
Type: TC
Location: 29643 - 30386 (+)
Gene ID: MGYG000003987_5_28
Type: pfam
Location: 30471 - 31187 (+)
Gene ID: MGYG000003987_5_29
Type: pfam
Location: 31180 - 32205 (+)
Gene ID: MGYG000003987_5_30
Type: CAZyme
Location: 32331 - 33683 (+)
Gene ID: MGYG000003987_5_31
Type: pfam
Location: 33737 - 34891 (+)
Gene ID: MGYG000003987_5_32
Type: STP
Location: 34991 - 36310 (+)
Gene ID: MGYG000003987_5_33
Type: CAZyme
Location: 36391 - 38844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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