Cluster: MGYG000003983_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003983
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003983_20 | MGYG000003983_20_1 | 3 | 881 | + | GT35 |
| TC | MGYG000003983_20 | MGYG000003983_20_2 | 1338 | 2537 | - | 3.A.1.1.22 |
| TC | MGYG000003983_20 | MGYG000003983_20_3 | 2606 | 3445 | - | 3.A.1.1.45 |
| TC | MGYG000003983_20 | MGYG000003983_20_4 | 3445 | 4299 | - | 3.A.1.1.45 |
| TC | MGYG000003983_20 | MGYG000003983_20_5 | 4387 | 5703 | - | 3.A.1.1.45 |
| TF | MGYG000003983_20 | MGYG000003983_20_6 | 6010 | 6729 | - | GntR |
| TC | MGYG000003983_20 | MGYG000003983_20_7 | 6954 | 9404 | + | 4.A.1.1.8 |
Gene ID: MGYG000003983_20_1
Type: CAZyme
Location: 3 - 881 (+)
Type: CAZyme
Location: 3 - 881 (+)
Gene ID: MGYG000003983_20_2
Type: TC
Location: 1338 - 2537 (-)
Type: TC
Location: 1338 - 2537 (-)
Gene ID: MGYG000003983_20_3
Type: TC
Location: 2606 - 3445 (-)
Type: TC
Location: 2606 - 3445 (-)
Gene ID: MGYG000003983_20_4
Type: TC
Location: 3445 - 4299 (-)
Type: TC
Location: 3445 - 4299 (-)
Gene ID: MGYG000003983_20_5
Type: TC
Location: 4387 - 5703 (-)
Type: TC
Location: 4387 - 5703 (-)
Gene ID: MGYG000003983_20_6
Type: TF
Location: 6010 - 6729 (-)
Type: TF
Location: 6010 - 6729 (-)
Gene ID: MGYG000003983_20_7
Type: TC
Location: 6954 - 9404 (+)
Type: TC
Location: 6954 - 9404 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902491055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.