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Cluster: MGYG000003983_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003983_4 MGYG000003983_4_2 1571 3337 + 4.A.3.1.1
CAZyme MGYG000003983_4 MGYG000003983_4_3 3404 4843 + GH1
TF MGYG000003983_4 MGYG000003983_4_4 5120 6157 - LacI
CAZyme MGYG000003983_4 MGYG000003983_4_5 6499 7941 + GH1
TC MGYG000003983_4 MGYG000003983_4_6 8118 9878 + 4.A.3.1.1
TF MGYG000003983_4 MGYG000003983_4_7 10057 11067 - LacI
TC MGYG000003983_4 MGYG000003983_4_8 11344 13122 + 4.A.3.1.1
CAZyme MGYG000003983_4 MGYG000003983_4_9 13199 14620 + GH1
pfam MGYG000003983_4 MGYG000003983_4_10 14988 16220 + Fic
STP MGYG000003983_4 MGYG000003983_4_11 16326 16721 - DeoRC
TC MGYG000003983_4 MGYG000003983_4_12 16884 18578 - 4.A.3.1.1
Gene ID: MGYG000003983_4_2
Type: TC
Location: 1571 - 3337 (+)
Gene ID: MGYG000003983_4_3
Type: CAZyme
Location: 3404 - 4843 (+)
Gene ID: MGYG000003983_4_4
Type: TF
Location: 5120 - 6157 (-)
Gene ID: MGYG000003983_4_5
Type: CAZyme
Location: 6499 - 7941 (+)
Gene ID: MGYG000003983_4_6
Type: TC
Location: 8118 - 9878 (+)
Gene ID: MGYG000003983_4_7
Type: TF
Location: 10057 - 11067 (-)
Gene ID: MGYG000003983_4_8
Type: TC
Location: 11344 - 13122 (+)
Gene ID: MGYG000003983_4_9
Type: CAZyme
Location: 13199 - 14620 (+)
Gene ID: MGYG000003983_4_10
Type: pfam
Location: 14988 - 16220 (+)
Gene ID: MGYG000003983_4_11
Type: STP
Location: 16326 - 16721 (-)
Gene ID: MGYG000003983_4_12
Type: TC
Location: 16884 - 18578 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003983_4_4 vegetarian > omnivore 1.12634 0.02677

🧭 Explore Read Mapping of CGC

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