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Cluster: MGYG000003980_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003980_3 MGYG000003980_3_24 22148 23542 + 2.A.66.1.33
pfam MGYG000003980_3 MGYG000003980_3_25 23539 24222 + Hydrolase | Hydrolase_like | HAD_2
TC MGYG000003980_3 MGYG000003980_3_26 24288 25196 - 3.A.1.3.10
TC MGYG000003980_3 MGYG000003980_3_27 25421 26185 - 3.A.1.3.14
TC MGYG000003980_3 MGYG000003980_3_28 26178 26864 - 3.A.1.3.8
TC MGYG000003980_3 MGYG000003980_3_29 26845 27504 - 3.A.1.3.2
STP MGYG000003980_3 MGYG000003980_3_30 28174 29457 + Aminotran_1_2
STP MGYG000003980_3 MGYG000003980_3_31 29589 30023 + CBS | CBS
CAZyme MGYG000003980_3 MGYG000003980_3_32 30155 32707 + GH3
Gene ID: MGYG000003980_3_24
Type: TC
Location: 22148 - 23542 (+)
Gene ID: MGYG000003980_3_25
Type: pfam
Location: 23539 - 24222 (+)
Gene ID: MGYG000003980_3_26
Type: TC
Location: 24288 - 25196 (-)
Gene ID: MGYG000003980_3_27
Type: TC
Location: 25421 - 26185 (-)
Gene ID: MGYG000003980_3_28
Type: TC
Location: 26178 - 26864 (-)
Gene ID: MGYG000003980_3_29
Type: TC
Location: 26845 - 27504 (-)
Gene ID: MGYG000003980_3_30
Type: STP
Location: 28174 - 29457 (+)
Gene ID: MGYG000003980_3_31
Type: STP
Location: 29589 - 30023 (+)
Gene ID: MGYG000003980_3_32
Type: CAZyme
Location: 30155 - 32707 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003980_3_24 vegetarian > vegan 1.58472 0.00536
MGYG000003980_3_25 vegetarian > vegan 1.71299 0.00536

🧭 Explore Read Mapping of CGC

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