Cluster: MGYG000003980_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003980
- CGC Family ID: CGCFAM_01640
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003980_124 | MGYG000003980_124_2 | 599 | 1402 | + | CE4 |
| TF | MGYG000003980_124 | MGYG000003980_124_3 | 1473 | 2111 | + | 0045030 |
| NULL(UNKNOWN) | MGYG000003980_124 | MGYG000003980_124_4 | 2202 | 2342 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003980_124 | MGYG000003980_124_5 | 2497 | 3351 | + | 2.A.115.1.5 |
Gene ID: MGYG000003980_124_2
Type: CAZyme
Location: 599 - 1402 (+)
Type: CAZyme
Location: 599 - 1402 (+)
Gene ID: MGYG000003980_124_3
Type: TF
Location: 1473 - 2111 (+)
Type: TF
Location: 1473 - 2111 (+)
Gene ID: MGYG000003980_124_4
Type:
Location: 2202 - 2342 (+)
Type:
Location: 2202 - 2342 (+)
Gene ID: MGYG000003980_124_5
Type: TC
Location: 2497 - 3351 (+)
Type: TC
Location: 2497 - 3351 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp905201305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003980_124_2 | vegetarian > vegan | 1.94828 | 0.00536 |
| MGYG000003980_124_4 | vegetarian > vegan | 1.38922 | 0.00536 |
| MGYG000003980_124_5 | vegetarian > vegan | 1.36811 | 0.00536 |