Cluster: MGYG000003980_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003980
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003980_89 | MGYG000003980_89_4 | 4392 | 5369 | + | 9.B.146.1.3 |
| TC | MGYG000003980_89 | MGYG000003980_89_5 | 5387 | 6517 | + | 2.A.103.1.3 |
| CAZyme | MGYG000003980_89 | MGYG000003980_89_6 | 6601 | 7725 | + | GT28 |
Gene ID: MGYG000003980_89_4
Type: TC
Location: 4392 - 5369 (+)
Type: TC
Location: 4392 - 5369 (+)
Gene ID: MGYG000003980_89_5
Type: TC
Location: 5387 - 6517 (+)
Type: TC
Location: 5387 - 6517 (+)
Gene ID: MGYG000003980_89_6
Type: CAZyme
Location: 6601 - 7725 (+)
Type: CAZyme
Location: 6601 - 7725 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp905201305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003980_89_4 | vegetarian > vegan | 1.19400 | 0.00536 |
| MGYG000003980_89_5 | vegetarian > vegan | 1.46736 | 0.00536 |
| MGYG000003980_89_6 | vegetarian > vegan | 2.23567 | 0.00536 |